Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00318 ATGGGAGCTCTGGCTACATTAGCTCCTTGGATTCCCGAGGACGATCTTTTGCTCAAGAACGCCGTTGAGGCTGGTGCTTCACTAGAGTCACTTGCTAAAGGTGCAGTGCAATTTTCTCGAAAATATAATATTAGAGAGATACAGGATAGATGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCGGAAGCTTCTACGGGTATGACAAACTTTGAGCTTTCAGCTTCGCCTCTCCCATCGAAATTCTATAGGTTTGGACATTCCAAAGAACATAAAGTTGTTTCAGCTAAAAGAAAGTCTGAAAGTGTTCGCAATTTGTATTATGCTAGGCGCAAAAGAATTCGCAATAGCATATTAACCTCCATGGACTTAAGTTTTCTAGTCGATCCGGTAAATGGTAATTATGCAGAGCATGGAAGTGACGACCCCTTGTCTGGAAACTGCATGCCTGAAGGTGGAACTTCAAATCATTTTTCAAATCTCCCAGCTCAGTATGATTTTCCTTGTGAAAATGTGATGGATGATAACGTAGCTTCTGATGCCGGTGTGTTTTTCCCTGGAGTTGAAAATGCAGTTGAAAAGAATTTGCCTGTCAAACTAAAGAGTGTGTTTAAGGAAGAACCTCAATTTCTTGGAGACAATGTGCCTTTGGATGGAGCTGTTGAGGAGTTGGATGTTCCTAGAGAATTGACCATAGATGGGTGGATTGGAGACAATGATTTAGAGACAATGCCTTTGGCCACATTGGATCACATCAACAGTGCCCCTGGAAATATGTGTCCTGATTTTGATGAAAACAATGTATTTGATTCATCGGAGTTAGAGTGTGGAACATCGTTTAACTTATCTTCTCTTCCTGAAATACCAGTCTGGAGTATAGATGAGGGCATTCAAGAACCTGATATGCCATGCGATGGTTTTAACGATTCTACTGCTTGTGGGGAGGCTTATTTGGAAGAACTGTCCAATTCTCTCCTCAACTTCAGTAGTGAGGAAGAACTCTTTCTGATGGATGTTGATGGAGAAGAAGGGATTGACAAGTCTTACTTTGATGGTCTGAGTTCACTCCTAACTTCTACAATTGATGCTAATCCAAGTCAAGTCCCTAAAAGGGATGAAACAGAGTCGTTAATGGCCTCACAGGCACATGTTATAAATCAGCCAGTTTCATGTAGCAAAGAGGTAGATGACAACCCAGGGTCAGCCGCTAGTGGTGTACAAGTAGTTCACAAATTAGAGTTCCAATTATCATCTCCTCCCTTGGTTGAAGACCCCCAATTTCCTGAACTAACTAATGAAGTTTCTTCCTGTTCACTGAACACTGAGGAACAAGAAATTCCAGATAATGAAGATGTTTTCCTACCATTTGATGTTCCTCCTGTCATATTTCCCCCTTCATCTAAACTAATTTTTAAAGCTTCCAAAAAACCAATTTCATCATCTGTTCAGGATTATGGATTTAATAAGCATAGAGCTAGTGAAAGGGGTAAAACTTTGATGCATGTAGAAAAGAAAACCCGTGTAGAATCTCATGCATCTTCTCAGATGACGGGATCTCTTTGCTTCCCAGGACCTGATGGTGGTTCTAAGGCAAAATTTGAGTTGCCTGGTAATCATCCATCACACGCAGTATCTATGAGTTCTGTTACTGTTCCTGGTCGCTTTGGTGGAAATGATACTGCAAACACTACTAATGCTCTTCTGCATGCAAATAAAAAGGAAGAAGCTACCAATGCTGGCTTGGCAAAGGATCCCAGCAATCGTGTGGCTTATCCTTTCGTTAAGAAATCAGCTGCTGATTCTAATGACTCAAGAAATCATGCCCAACTTAATGGTTCTAGCATAAAAAGTGAACAAGATTTAGCTTTGCCACTTCAAGATCACCAGTTGCAATGTGCTGAAGTGGGATCCTCAGATGTTCTTGAGTCAGAGCTGGTGGCAAATCCTCCAACATTAGACGAGGAAGAGCAATATATAGAGAGTGACGATGAGCTTCCTTCTTATTCTGATGTAGAAGCGATGGTACTTGATATGGACTTCGATCCTGATGATCATCAGGATTCTTCTTATAACGAGGAAGTATCAAGATATCAAAATGTGGAAAGTAAGCGAGCTATTATGAGGCTAGAACAGGGTATCCATTCTTGTATTCAGAGAGCTATTGAAGCACATGGAGCATTTGCCATTTTATATGGTCGCTACTCAAAGCATTATATTAAGAAACCTGAGGTTCTTCTTGGACGAGCAACAGAAGGTTTTCCTGTGGACATTGACTTGAGCAAAGGAGGGCATAGCAATTCAGTATCTCGACGTCAGGCAATTATAAAGATGGATAAAGAGGGATCATTTTACATAAAAAACTTCGGCAAGAGTTCAGTCCTGGTAAATAGCAAAGAAGTGCACACTGGTCAGTCTCAAAGACTGCATACTAATTATCTGATTGAGGTGAGGGGCATACCGTTGATATTTGAGGTAAATCAAAATCGGGTGAAGCAGTACCTGGATCACATTTCTGACAATTCACAGACCTTTTAG 2535 0.4095 MGALATLAPWIPEDDLLLKNAVEAGASLESLAKGAVQFSRKYNIREIQDRWYSLLYDPVISAEASTGMTNFELSASPLPSKFYRFGHSKEHKVVSAKRKSESVRNLYYARRKRIRNSILTSMDLSFLVDPVNGNYAEHGSDDPLSGNCMPEGGTSNHFSNLPAQYDFPCENVMDDNVASDAGVFFPGVENAVEKNLPVKLKSVFKEEPQFLGDNVPLDGAVEELDVPRELTIDGWIGDNDLETMPLATLDHINSAPGNMCPDFDENNVFDSSELECGTSFNLSSLPEIPVWSIDEGIQEPDMPCDGFNDSTACGEAYLEELSNSLLNFSSEEELFLMDVDGEEGIDKSYFDGLSSLLTSTIDANPSQVPKRDETESLMASQAHVINQPVSCSKEVDDNPGSAASGVQVVHKLEFQLSSPPLVEDPQFPELTNEVSSCSLNTEEQEIPDNEDVFLPFDVPPVIFPPSSKLIFKASKKPISSSVQDYGFNKHRASERGKTLMHVEKKTRVESHASSQMTGSLCFPGPDGGSKAKFELPGNHPSHAVSMSSVTVPGRFGGNDTANTTNALLHANKKEEATNAGLAKDPSNRVAYPFVKKSAADSNDSRNHAQLNGSSIKSEQDLALPLQDHQLQCAEVGSSDVLESELVANPPTLDEEEQYIESDDELPSYSDVEAMVLDMDFDPDDHQDSSYNEEVSRYQNVESKRAIMRLEQGIHSCIQRAIEAHGAFAILYGRYSKHYIKKPEVLLGRATEGFPVDIDLSKGGHSNSVSRRQAIIKMDKEGSFYIKNFGKSSVLVNSKEVHTGQSQRLHTNYLIEVRGIPLIFEVNQNRVKQYLDHISDNSQTF 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00318 844 Gene3D - 684 836 - -
Spst9g00318 844 SUPERFAMILY SMAD/FHA domain 727 827 IPR008984 GO:0005515
Spst9g00318 844 FunFam Microspherule protein 1 687 836 - -
Spst9g00318 844 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Spst9g00318 844 PANTHER MICROSPHERULE PROTEIN 1 7 842 IPR037912 GO:0002151|GO:0031011|GO:0071339
Spst9g00318 844 CDD FHA_MCRS1 723 826 - -
Spst9g00318 844 SMART FHA_2 743 800 IPR000253 GO:0005515
Spst9g00318 844 ProSiteProfiles Forkhead-associated (FHA) domain profile. 744 800 IPR000253 GO:0005515
Spst9g00318 844 Pfam FHA domain 745 815 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00318 Spst-Chr9 3027296 3032026 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00318 - - gmx:100786493 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00318 9 3027296 3032026 Spst9g00318 9 3027296 3032026 ECH