Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00252 ATGAGAACGGAGATGAAGGATGAAACTCAAGCTCTGGTGAATGATACTGGTAACCTTGGGAAATTCTCACAACTCCTTGCTTCCGGAGATCGTGATTATCTTCTCTCTCCAACCGGGGCTCAGGTGAAAGTTTCTGGTCTTGAAGGGAAAGTAGTGGGTCTGTTATTCGCTGCCAATTGGTACCCACCATGCCGCGGATTCACCCAAGTCCTAGTTGGAATCTACGAGGAGTTGAAAAGCCGTGTTCCCCAATTTGAGATTGTGTATGTGTCCTCTGACGAGGACTTGGACGCCTTTAATAACTTCTATGGAAACATGCCGTGGCTAGCGATTCCGTTCTCTGATTTGGAAACAAAGAAATCCTTGACCAGAAAGTATGAGGTGGAAGGCATTCCATGCTTGATTTTGCTGCAACCAGAGGATGGTAAAGATGCGGCAACAGTTCGTGATGGAGTTGAACTTATTTACCGTTATGGAGTCCAAGCTTATCCCTTCTGTAACCAGAGGTTGGAACAACTGCGTAAGGAAGATAAAGTGAAGCGTGAAAACCAGACCCTCCTTAATTTACTAGCAAACCAACATAGAGACTATGTTTTGAGTCACTCTCACTCTGGGCTGAAACAGGTACCTGTTGCTTCTCTGGTGGGAAAAACAATTGCACTCTACTTTTCCGCGGAATGGTGCGTCCCATGCGCCAAGTTCACTCCCAAACTCATTTCCGTTTACGAGAAAATTAAGCACGAGCTAGCCGAGAAGGGAGAGGAAGACTTCGAAGTTGTGCTGGTATCCAGCGACCGTGACAAAGCATCCTTTGACTCCTACTACAGCAGCATGCCTTGGTTAGCCTTGCCTTTCGGTGACTCCGAGATCAAGAACCTCGTTCGCCACTTCAACGTTCAAGGGATTCCTTGGTTGGTGATTATAGGTCCTGATGGTAAAACAATAACAGTGCATGGTAGGAGCTTGATCAACTTGTACCAAGAGAGCGCTTACCCTTTCACGAGCGCCAAAGTGGAGGAGCTGGAGAAACAGCTGGAGGAAGAGGCGAAGGATCTTCCAGCGTTGGTGTATCATGAAGGGCATCGACATGACCTGAATTTGGTGTCAGATGGGAACGGTGGAGGACCCTTTATCTGCTGTGTGTGCGATGAACAAGGGTCTAGTTGGGCTTACCAGTGTCTCCAATGTGGATATGAAGTGCACCCCAAGTGCGTCAGAACTGTGGACCGTGACAACAGTGTGTTAATAACTAATTAA 1257 0.4733 MRTEMKDETQALVNDTGNLGKFSQLLASGDRDYLLSPTGAQVKVSGLEGKVVGLLFAANWYPPCRGFTQVLVGIYEELKSRVPQFEIVYVSSDEDLDAFNNFYGNMPWLAIPFSDLETKKSLTRKYEVEGIPCLILLQPEDGKDAATVRDGVELIYRYGVQAYPFCNQRLEQLRKEDKVKRENQTLLNLLANQHRDYVLSHSHSGLKQVPVASLVGKTIALYFSAEWCVPCAKFTPKLISVYEKIKHELAEKGEEDFEVVLVSSDRDKASFDSYYSSMPWLALPFGDSEIKNLVRHFNVQGIPWLVIIGPDGKTITVHGRSLINLYQESAYPFTSAKVEELEKQLEEEAKDLPALVYHEGHRHDLNLVSDGNGGGPFICCVCDEQGSSWAYQCLQCGYEVHPKCVRTVDRDNSVLITN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00252 418 SUPERFAMILY Thioredoxin-like 35 140 IPR036249 -
Spst9g00252 418 PANTHER THIOREDOXIN 20 389 - -
Spst9g00252 418 SUPERFAMILY Thioredoxin-like 199 318 IPR036249 -
Spst9g00252 418 Gene3D Glutaredoxin 195 335 - -
Spst9g00252 418 Gene3D Glutaredoxin 26 166 - -
Spst9g00252 418 Pfam C1 domain 360 405 IPR004146 -
Spst9g00252 418 SUPERFAMILY Cysteine-rich domain 349 406 IPR046349 -
Spst9g00252 418 SMART c1_12 361 410 IPR002219 -
Spst9g00252 418 ProSiteProfiles Thioredoxin domain profile. 188 350 IPR013766 -
Spst9g00252 418 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 360 412 IPR002219 -
Spst9g00252 418 CDD C1 379 411 - -
Spst9g00252 418 Pfam Thioredoxin-like 49 142 IPR012336 -
Spst9g00252 418 Pfam Thioredoxin-like 216 313 IPR012336 -
Spst9g00252 418 CDD TryX_like_TryX_NRX 196 333 IPR045870 GO:0004791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00252 Spst-Chr9 2305206 2310658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00252 K17609 - gmx:100815038 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00252 9 2305206 2310658 Spst9g00252 9 2305206 2310658 ECH