Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00250 ATGGCGAAGGGAAAGCATGCGCATACCCGAGCGCAGGGGAAGAAGTGGTCCACGTTTTCGCTCTTTTTGTGGACACTTTTCTTCCTCACTCTTATCCTCGTCGTGCTTCTCGCTCTCGGCATTGTTTATCTTCCAACTACCGACGACGATTTTCCAACCGCGGATCTCACCGCTTTTAGGCGCAAGACCTCTCAAAGTGGTGAGAGTTTGGTGGAGAAACCGGAGCAGTGGACCGAAATTCTCTCCTGGGAGCCAAGAGCGTTTATCTATCACAATTTTCTGTCGAAAGAAGAATGCGAGTACCTGATTGAACTTGCCAAACCTTACATGGTAAAATCTAGTGTTGTTGATAGTAAGACTGGGAAGAGTACAGAAAGCAGGGTTCGAACTAGTTCAGGAATGTTTCTGAAGAGAGGAAAGGACAAAGTTGTCCAGAATATAGAGAAAAGAATTGCTGACTTTACCTTCATACCTGTAGAGAATGGAGAAGGACTTCAAATTCTTCACTACGAAGTAGGCCAAAAATACGAGCCTCACTATGATTACTTCCTTGATGAATTCAACACTAAGAATGGAGGCCAACGTATTGCTACAATTCTTATGTACCTTTCAGATGTTGAAGAAGGTGGTGAGACTGTATTTCCTGCTGCCAACGCAGATTTTAGCTCTGTGCCATGGTGGAATGATTTATCCCAATGTGCAAGAAAGGGTCTCTCCGTGAAACCAAAAATGGGTGATGCTCTGCTATTTTGGAGCATGAGGCCTGATGCCACACTAGATCCATCTAGTTTACATGGTGGTTGCCCAGTGATTAAAGGAAATAAATGGTCCTCAACAAAGTGGTTGCATCTTCATGAGTACAAGGTTTGA 870 0.4425 MAKGKHAHTRAQGKKWSTFSLFLWTLFFLTLILVVLLALGIVYLPTTDDDFPTADLTAFRRKTSQSGESLVEKPEQWTEILSWEPRAFIYHNFLSKEECEYLIELAKPYMVKSSVVDSKTGKSTESRVRTSSGMFLKRGKDKVVQNIEKRIADFTFIPVENGEGLQILHYEVGQKYEPHYDYFLDEFNTKNGGQRIATILMYLSDVEEGGETVFPAANADFSSVPWWNDLSQCARKGLSVKPKMGDALLFWSMRPDATLDPSSLHGGCPVIKGNKWSSTKWLHLHEYKV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00250 289 SMART p4hc 85 283 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst9g00250 289 FunFam Prolyl 4-hydroxylase 4 77 284 - -
Spst9g00250 289 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 284 IPR005123 -
Spst9g00250 289 Gene3D q2cbj1_9rhob like domain 78 284 - -
Spst9g00250 289 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 65 286 IPR045054 -
Spst9g00250 289 Pfam 2OG-Fe(II) oxygenase superfamily 165 283 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00250 Spst-Chr9 2291987 2295106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00250 K00472 - gmx:100818586 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00250 9 2291987 2295106 Spst9g00250 9 2291987 2295106 ECH