Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00224 ATGCAAGCTGCATCTTCAGGAATTGGATACGGTCTCAAATATCAGGCTAGATGCATATCGGATGTAAAAGCAGACACAGATCACACTAGCTTCCTCGCTGGCACTCTCAGCCTCAAAGAAGAAAACGAGGTACATCTGATTCGGCTCTCGTCCAGTGGAACCGAACTCTTCTGCGAGGGATTGTTTTCTCACCCCAACGAGATCTGGGACCTCGTCTCTTGTCCGTTTGATCAACGGATCTTTTCCACTGTCTACTCTAACGGTGAAACGTTTGGGGCAGCAATATGGCAGATACCTGAGTTATATGGCGAGTTAAATTCCCCTCAGCTAGAGAGAATTACCTCCCTTGACACTGATTCTTGCAAGATTAAATGTATTCTTTGGTGGCCATCTGGAAGACATGATAAATTGATCAGCATCAATGAGGAAAATCTGTACTTGTGGAATCTAGATGTTTCAAAGAAAACTGCACAGGAAGAATTCATGATGATTTGGCAAAGCTCCTCCACTGCCTTCCCATATATTCAAACAAAACCTCAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGGATCCCCATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCATATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATTTCAGTTGAATGTTCTCATGTATGCAGTGTTGATTACCATCCTCAGAAGCAGCACATACTTGTGACGGCAGAACATGAGTCTGGAATACATATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCCGGACATACTCATTGGACATGGACTGTCAAGTGTAATCCAGAGTATGACGGAATGATCTTGAGTGCTGGTACGAATTCAACTGTCAACTTGTGGCTTGCCTCAACGAATCATGAGGAGTTAACAACTGAAAGACAAGTAGATTCATCTGCCCGATGGGTTGATCCATTGCTTAATACATACAGTGATTATGAAGACAGCATTTATGGGCTCACGTGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAGAATCAGTTAAGCCTTTCATCCCCCAAAAATGA 1119 0.4325 MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETFGAAIWQIPELYGELNSPQLERITSLDTDSCKIKCILWWPSGRHDKLISINEENLYLWNLDVSKKTAQEEFMMIWQSSSTAFPYIQTKPQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESYLQFWDVRTMKKTISVECSHVCSVDYHPQKQHILVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTNSTVNLWLASTNHEELTTERQVDSSARWVDPLLNTYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKPFIPQK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00224 372 PANTHER WD-REPEAT PROTEIN 1 371 IPR040323 -
Spst9g00224 372 FunFam WD repeat-containing protein DWA2 14 368 - -
Spst9g00224 372 Gene3D - 13 369 IPR015943 GO:0005515
Spst9g00224 372 SMART WD40_4 324 364 IPR001680 GO:0005515
Spst9g00224 372 SMART WD40_4 55 97 IPR001680 GO:0005515
Spst9g00224 372 SMART WD40_4 263 303 IPR001680 GO:0005515
Spst9g00224 372 SMART WD40_4 219 259 IPR001680 GO:0005515
Spst9g00224 372 SMART WD40_4 109 149 IPR001680 GO:0005515
Spst9g00224 372 SUPERFAMILY WD40 repeat-like 18 362 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00224 K23289 - gmx:100779030 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00224 9 1980793 1985713 Spst9g00224 9 1980793 1985713 ECH