Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00187 ATGGCTAGGCGTCATGGATGGGAACTTCCTTTTCACACTTTTCAGGTCGTGGCTATAACAGTATTTTTCTTGCTATCTATTGCATATTATGCCTTCTTTGCTCCTTTTCTTGGAAAGGACATCTATGAGTATGTGGCTATTGGTGTTTACTCTTTATTGGCTCTCTCTGTGTTCTTTCTTTATGTTCGATGCACTGCTATTGATCCTGCTGATCAAGGTGTAAAGCTTGACTGTGATAAGTCATCAAAGAATAGATCAAAACATGATGAGGAGTTGGCAGAACCGAGCAAGATAATGTCTGATCGGCATAATTCAAATTGGTGCTCCAAAGTTGGATGCTTCTTCTGTAGTTTTCTTGTTAGAGAAGATTGCCGCAGTAATGAAGATATTGTTCCGCAGCAGCAATCTGGAGAAGAGGATGCTTTGTTCTGCACTTTGTGCAATGCTGAGGTACGCAAGTTCAGTAAGCATTGTCGAAGTTGTGACAAATGTGTTGATGGATTTGATCATCATTGTCGGTGGTTGAACAATTGTGTTGGAAAGAAGAATTATATCACGTTTGTGTGTCTTATGGCAGTGAGCCTAGTTTGGCTTATTGTTGAATGTGGAGTTGGGATTGCAGTACTTGTCAGATGCTTCGTTGATAAGAGAGGTACAGAGAATCAGATAGCTGACAAACTTGGAGCTGGATTTTCTCGGGTCCCATTTGCTACTATAGTGGCCATATGCACGGCAGTTTCATTCCTTGCAACAGTGCCGTTGGGAGAATTGTTCTTTTTCCATATGATCCTGATACGAAAGGGTATCACAACTTACGAGTATGTTGTTGCCATGAGAACTCTAAGTGAACCACCTGGTCCTTCAGTTGACGGAGGTGAACAACAGAGTCTACCATCATCCCCTACTAGTTCAGCCATCACTGCAATGAGTGGAAGAAGCTCCGTTGGGATGAGTTTGCAGTACAAAGGTGCCTGGTGTACACCTCCAAGGATCTTTATGGATCACCCGGATGAAATTATACCACATTTGGAGCCCGGACGCCTACCATCCACTGTTGATCCAGATGCAGTACAACCACCTGACAAAGGGAAAAAGTTGAACCAGCGCCCTGTGCGGATAAGTGCATGGAAACTTGCGAAATTGGATTCTAATGAGGCAACTAAGGCAGCTGCTAAAGCCAGAGCATCATCATCTGTGCTTCGTCCAATTAGTTCACGATCTAATGCATATGATGTTGATCATTTATCCAGTAGCAATGTGAGTGGAAGAAGCAGCCCAATTAGCAATCATGGATTTCATAACAAATATGATACAGCGGGGACATCAAGGTTATCTCCTTCCAAGAGCTCATACGCTCCTAGTCAAGCTAGCAAGGATGATATAGATGCATCATGTCATCACAGTATGAGCAACTTCAGCAGTCCACAAGTCTCAAACCTTACTCCTTCGCCACTGCAGAAGCCAAGTTTGAACAGTGACCATTTCAACCCCATGTATCAACAACCATCAGGAAATCAGTCCCCTTCATCAGCTAAAGAAAGTGAGGGGAACATGAATCCAGTTCAAGAAAATAATGTGGCACGTGTTCCAATGAGAAGCAACAGCTTAGCTGTTTCAGATAATAGAAGATCATCAGTGTTTTGGGATCAAGCTGCTGGACGCTTTGTCTCATCCTCATCAAGAGGAGGTTCTGGCAGTTCCCAGATATCTGGAACAGAGTTATTGTACACTGGACGATCTATATTTTTTGGCAGTCCCGTTGTGAATGAACAACCAAACACGGGGACAAGAATTAGCAGTTCAGTACCAGGTATTCCGGATAGAGATTCTACATTAAGGGATTTTCAACAAGGAAGATCATATAGAGGTGGCCAGCTTCCTGTGTTTGTTCCTGGTTATTCCCAGCAAAACAAGTTCTCCTAG 1923 0.4316 MARRHGWELPFHTFQVVAITVFFLLSIAYYAFFAPFLGKDIYEYVAIGVYSLLALSVFFLYVRCTAIDPADQGVKLDCDKSSKNRSKHDEELAEPSKIMSDRHNSNWCSKVGCFFCSFLVREDCRSNEDIVPQQQSGEEDALFCTLCNAEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGKKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDKRGTENQIADKLGAGFSRVPFATIVAICTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQQSLPSSPTSSAITAMSGRSSVGMSLQYKGAWCTPPRIFMDHPDEIIPHLEPGRLPSTVDPDAVQPPDKGKKLNQRPVRISAWKLAKLDSNEATKAAAKARASSSVLRPISSRSNAYDVDHLSSSNVSGRSSPISNHGFHNKYDTAGTSRLSPSKSSYAPSQASKDDIDASCHHSMSNFSSPQVSNLTPSPLQKPSLNSDHFNPMYQQPSGNQSPSSAKESEGNMNPVQENNVARVPMRSNSLAVSDNRRSSVFWDQAAGRFVSSSSRGGSGSSQISGTELLYTGRSIFFGSPVVNEQPNTGTRISSSVPGIPDRDSTLRDFQQGRSYRGGQLPVFVPGYSQQNKFS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00187 640 MobiDBLite consensus disorder prediction 292 308 - -
Spst9g00187 640 MobiDBLite consensus disorder prediction 413 540 - -
Spst9g00187 640 ProSiteProfiles DHHC domain profile. 142 192 - -
Spst9g00187 640 MobiDBLite consensus disorder prediction 285 308 - -
Spst9g00187 640 MobiDBLite consensus disorder prediction 342 371 - -
Spst9g00187 640 MobiDBLite consensus disorder prediction 466 540 - -
Spst9g00187 640 Pfam DHHC palmitoyltransferase 140 276 IPR001594 GO:0016409
Spst9g00187 640 MobiDBLite consensus disorder prediction 413 457 - -
Spst9g00187 640 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 21 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00187 Spst-Chr9 1651997 1657508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00187 122 273 Lipid Metabolism Gene Families AT4G22750 25.806 6.66e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00187 K20027 - gmx:100818808 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00187 9 1651997 1657508 Spst9g00187 9 1651997 1657508 ECH