Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00185 ATGAGTTCTTCCCCTTGCGCTTGCGCTTCTAATTCAACGAATTGGAGCATTGATTATGGAGGTACCATGCTTTCAAATTCAAAGCGAATCAGGTCCGCACAATTCGCCATGCCACTCTCAGTTTCTGCTTCGAGAAGATCCACGGCGCTTCTCATTTCGTCGTTGCCTTTCACCTTCCTTTTCCTCTCTCCGCCAGCGGAAGCCAGACGCAACAAGAAGACAATCCCCGAAGAGGAATACATTACAACTCCTGATGGATTGAAATACTATGATTTGGTTGAGGGAAATGGTCCAGTAGCTGAAAAAGGAACCACCGTTCAGGTGCACTTTGATTGCTTATATCGCGGGATCACAGCTGTATCCAGTCGAGAATCTAAACTCCTAGCGGGAAATCGTATCATTGCTCAGCCGTACGAATTCAGGGTGGGAGCTCCTCCGGGAAAGGAAAGGAAACGGGACTTTGTTGACAATCCAAATGGTTTATTCTCTGCTCAAGCAGCTCCCAGACCTCCACCTGCTATGTATTCAATAGTGGAAGGAATGCGAGTTGGTGGAAAGCGAACTGTGATTGTTCCTCCTGAAAATGGTTATGGACAAAAGGGAATGAATGAGATCCCGCCTGGAGCTACATTTGAACTCAATGTTGAGCTTCTGCAAGTTGTAGTTACCTGA 672 0.4673 MSSSPCACASNSTNWSIDYGGTMLSNSKRIRSAQFAMPLSVSASRRSTALLISSLPFTFLFLSPPAEARRNKKTIPEEEYITTPDGLKYYDLVEGNGPVAEKGTTVQVHFDCLYRGITAVSSRESKLLAGNRIIAQPYEFRVGAPPGKERKRDFVDNPNGLFSAQAAPRPPPAMYSIVEGMRVGGKRTVIVPPENGYGQKGMNEIPPGATFELNVELLQVVVT 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00185 223 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 103 221 IPR001179 GO:0003755
Spst9g00185 223 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 98 218 IPR001179 GO:0003755
Spst9g00185 223 Gene3D - 65 222 IPR046357 GO:0003755
Spst9g00185 223 FunFam Peptidylprolyl isomerase 63 223 - -
Spst9g00185 223 SUPERFAMILY FKBP-like 72 220 - -
Spst9g00185 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 31 221 IPR044180 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00185 Spst-Chr9 1644361 1646068 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00185 K01802 - gmx:100527183 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00185 9 1644361 1646068 Spst9g00185 9 1644361 1646068 ECH