Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00184 ATGAAAAGCGGCATGATGAGATCGAATCTGCTTTTGTTTATATTTCCGATTGTCCTTGCATTTGTCTTTCTGTCTTCGACTGTGCTCTCTGCTTCGGATCTGATCCTCGCCAAGGTTGACCGTCGTATTGATCTGACATCACAAATTGTGCGCATCACTGCTTCACTAAAGGTGGAGAATGCGGGATCTGATGTTGTCTCTGAGATTTTGCTGTCCTTTCCTGAAAACCAGGCAAAGCACTTGGCATACTTGAAAGCAACACTTAGCGAAGGGAAGGGTAAAGTAAAAACATCTTCTGGTGTTGGTTTGCCCATTGAAGCTATCCACCCTAAAGATGTACCTCCTGCCTTGACAATTTATTCCGTATCTTTACCAAAGGGGCTTGGGAAGGGACGTAGTTTGACGTTAGATGTCTTGGCCGTTTATACCCACATATTGCAACCATTTCCAGAGAAAATCAACCAGGCTGACATCCAACTTCTACTATTTCAAGAGAGTGCACAGTATCTCTCTCCATATGCTGTCAAGGCCCAATCACTCACTGTTAAGTTGCCTGATGCCAGAATAGAGTCGTATTCTAAACTAGAAAATGCTAAACTTCAGGGATCTGAATTAAAATATGGTCCATATGAGAATCTTCCTCCATTCTCATTCTTACCAATAGTTATTCACTTTGAGAATAACCAACCCTTTGCTGTTGCTAAAGAGTTGGTGCGAGAGATTGAAATTTCTCACTGGGGCAATGTACAGGTCACAGAGCATTATGATATTATTCATGCTGGTGCTCAGAGCAAAGGAGAATTTTCTAGGCTTGACTATCAGACCAAGCCATATTTAAGGGGTGCATCAGCCTTTAGGCATCTTGTTGCCAAGCTGCCACCAAGAGCTCATTCTGTGTACTACAGGGATGAAATTGGCAACATTTCCACTTCCAGTTTATGGGGTGACTCAAAAAAGACAGAACTGGAGATTGAACCTAGGTACCCTATGTTTGGTGGCTGGAAAATTGCCTTTACTATTGGATATGGCTTGCCACTTCAGGACTTCTTATTTGGATTGGATGGAAAGCGCTTCCTTAATATCACTTTTGGTGCCCCTATTAATGAGTTGGTGATTGACAATCTTTTTGTGAAGGTTGTTTTGCCAGAGGGTTCTAAAGACATTTCAGTATCTGTTCCATTTCCTGTGAAAGAATGGCAGGAGACGAAGATTTCCCACTTGGATATTGTCGGTAGACCTGTTGTTGTTCTGGAGAAGAACAATGTTGTCCCTGAGCATAATGAGCATTTTCAGGTCTATTATAAGTTCAACAGTCTTTCTATGCTCAGGGAGCCTTTGATGTTGATTTCTGGGTTTTTCTTTCTGTTTGTTGCTTGCATTGTCTACTCACATGCAGATATATCAATCTCCAAATCTTCTGCATCTTATATGGCAAAACTCCAGTGGGACGAGGTGCAAGCAACTATTCAGCAAGTCCATGGTATCATTAATCGTTGCTTGACAGCACATGACAAGCTAGAAACATCATTGCACGAACTTTCTAGGACAGGAGATGTTCAAGCCTGTAAAGCAACTCGAAAATCGGTAGATAGCTCATTGAAGGAGCTCTCTAAAGAGTTGAAGCAACCATTAGCATTTTTGCAATCTTCTCCACAAGCTGCTCAAATATTACCAAAGGTGGAGGAACTTGTTACTAAGGAGAGAGAATTGCAGGAGAAACTTATATTGAAACACACTACAGCTGTAGAAGGCTATGAGAAGAAGTTGGGAGGAAGGGAAATTGAGAATCGGATTGCTTCATATCAGCAGAAGATTACTGCTTTGAGACGGGAGATTGACGATCTTATGGACTTGATTGATGAGATATGA 1869 0.4168 MKSGMMRSNLLLFIFPIVLAFVFLSSTVLSASDLILAKVDRRIDLTSQIVRITASLKVENAGSDVVSEILLSFPENQAKHLAYLKATLSEGKGKVKTSSGVGLPIEAIHPKDVPPALTIYSVSLPKGLGKGRSLTLDVLAVYTHILQPFPEKINQADIQLLLFQESAQYLSPYAVKAQSLTVKLPDARIESYSKLENAKLQGSELKYGPYENLPPFSFLPIVIHFENNQPFAVAKELVREIEISHWGNVQVTEHYDIIHAGAQSKGEFSRLDYQTKPYLRGASAFRHLVAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPMFGGWKIAFTIGYGLPLQDFLFGLDGKRFLNITFGAPINELVIDNLFVKVVLPEGSKDISVSVPFPVKEWQETKISHLDIVGRPVVVLEKNNVVPEHNEHFQVYYKFNSLSMLREPLMLISGFFFLFVACIVYSHADISISKSSASYMAKLQWDEVQATIQQVHGIINRCLTAHDKLETSLHELSRTGDVQACKATRKSVDSSLKELSKELKQPLAFLQSSPQAAQILPKVEELVTKERELQEKLILKHTTAVEGYEKKLGGREIENRIASYQQKITALRREIDDLMDLIDEI 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00184 622 Pfam Ribophorin I 37 462 IPR007676 GO:0006486|GO:0016020
Spst9g00184 622 PANTHER RIBOPHORIN I 14 478 IPR007676 GO:0006486|GO:0016020
Spst9g00184 622 Coils Coil 591 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00184 Spst-Chr9 1637882 1641812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00184 32 560 Miscellaneous Gene Families AT1G76400 67.108 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00184 K12666 - gmx:100817203 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00184 9 1637882 1641812 Spst9g00184 9 1637882 1641812 ECH