Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00179 ATGTTTGTACAGTTTTCAGGGATAAATGGGGTTCTATACTACACACCTCAAATCCTCGAAGAGGCCGGTGTTGAAGTTCTTCTTGCAGATATTGGCATTGGCTCAGCATCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCTTGTATAGCCTTGGCCATGAAGCTCATGGATGTTTCAGGAAGAAGGCAGTTGCTACTTACTACAATTCCCGTGCTGATTGTGTCACTGATTATTTTGGTGATTGGAAGTCTAGTAGATTTTGGCAACGTGGCCCATGCTGCAATCTCAACTACATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTACGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATATGTGCCTTAGTGTTCTGGATTGGAGACATCATTATCACATACTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTCTTCGCCATTTATGCCGTCGTTTGCTTCATCTCCTGGATATTTGTGTTTCTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAGGCAAGCTGCTACAGCCAAGAATGAGTAA 645 0.4465 MFVQFSGINGVLYYTPQILEEAGVEVLLADIGIGSASASFLISAFTTFLMLPCIALAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVDFGNVAHAAISTTCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGARQAATAKNE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00179 214 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 208 - -
Spst9g00179 214 FunFam Monosaccharide-sensing protein 2 1 203 - -
Spst9g00179 214 Pfam Sugar (and other) transporter 1 201 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst9g00179 214 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 190 IPR020846 GO:0022857
Spst9g00179 214 SUPERFAMILY MFS general substrate transporter 1 195 IPR036259 -
Spst9g00179 214 Gene3D MFS general substrate transporter like domains 1 212 IPR036259 -
Spst9g00179 214 PRINTS Sugar transporter signature 3 13 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00179 214 PRINTS Sugar transporter signature 125 137 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst9g00179 214 PRINTS Sugar transporter signature 102 123 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00179 Spst-Chr9 1609521 1610681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00179 4 214 Organic Solute Cotransporters AT4G35300 74.882 1.11e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00179 - - gmx:100811857 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00179 9 1609521 1610681 Spst9g00179 9 1609521 1610681 ECH