Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00153 ATGGCTTCTACCACTCCTTCTCGATCAATTCTTCTGTTCCTTTCTTTGTTCGCCGTCGCTCTCTCCCTTGCAAACTCTCAATCTTTCATCGGAGTAAACTACGGCCAGCTCGCCGACAACCTTCCGCCGCCGGACTCCACCGCCGGCCTACTTAAATCCACCTCCATCGGAAAAGTCCGTCTCTACGGCGCCGATCCCGCCGTCATCAAGGCCCTCGCCAATTCCGGCATCGGGATCGTCATTGGGGCAGCCAATGGCGACATTCCGAGTCTGGCCTCCGATCCCAACGCGGCCACTCAGTGGGTTAACGCGAACGTGTTACCCTATTACCCCGCCAGCAACATCACTACCATCACCGTCGGCAACGAGATTCTAACCCTGGCTGACCAGGGTCTTGTCTCGCAGCTCGTGCCGGCGATGCGGAATCTCCAGAATGCTCTCAACGTGGCCTCTGTGAAGATCAAGGTCTCCACGGTGCACTCCATGGCCGTGTTGACTCAGTCGGATCCACCGTCGTCTGGGTTGTTCAACCCGGCGCTCCAGAACACGCTGAAAGAGTTGCTGGCGGTTCTGAAGGATAACAAATCGCCGTTCACGATCAACCCGTACCCGTTCTTTGCTTACCAGAGCGACCCGAGACCCGAAACGCTGGCGTTTTGCCTCTTCCAGCCCAACTCGGGGCGGGTCGACTCGGGCAACGGAAAGCTCTACACGAACATGTTCGATGCCCAGGTTGATGCTGTACATTCTGCTTTGAGTGCCATGGGCTTCCAGGACATCGAGATTGTGGTTGCTGAGACTGGATGGCCCTCACGTGGTGACAGTAACGAAGTAGGACCCAGTCTTGAAAATGCAAAGGCCTATAACGGGAACCTGATTAATCATCTTAGATCATTGGTTGGTACACCTTTGATGCCTGGGAAGTCTGTGGACACTTACATTTTTGCACTCTATGATGAGGATCTCAAACCCGGCCCAGGATCTGAGCGCGCGTTTGGGCTGTTCAAAACTGATGGCACCATGGCATACGATGCTGGCTTAGTCAAGTCTAGCCAGCAGACTCCATCAACTAGTCCGACAACTCCGGTTACTCCAGCACCTAAGACTGCTGGATGGTGTGTACCCAAAGCTGGAGTTTCTGATGATCAGTTGCAGGCCAATATTGACTACGCCTGTAGCCAAGGCATAGATTGCGGACCAATTCAACCAGGAGGTGCTTGTTTTGAGCCTAACACAAGAGCATCCCATGCTGCATTTGCCATGAATCTCTACTACCAAACATCTGGAAAAAATCAATGGAACTGTGATTTTTCTCAATCAGCAACACTAACATCCCAAAATCCAAGTTACAATTCTTGCACATTCGCCGGTGGGAGCTCCTGA 1383 0.5293 MASTTPSRSILLFLSLFAVALSLANSQSFIGVNYGQLADNLPPPDSTAGLLKSTSIGKVRLYGADPAVIKALANSGIGIVIGAANGDIPSLASDPNAATQWVNANVLPYYPASNITTITVGNEILTLADQGLVSQLVPAMRNLQNALNVASVKIKVSTVHSMAVLTQSDPPSSGLFNPALQNTLKELLAVLKDNKSPFTINPYPFFAYQSDPRPETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSAMGFQDIEIVVAETGWPSRGDSNEVGPSLENAKAYNGNLINHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPGSERAFGLFKTDGTMAYDAGLVKSSQQTPSTSPTTPVTPAPKTAGWCVPKAGVSDDQLQANIDYACSQGIDCGPIQPGGACFEPNTRASHAAFAMNLYYQTSGKNQWNCDFSQSATLTSQNPSYNSCTFAGGSS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00153 460 FunFam Glucan endo-1,3-beta-glucosidase 14 28 353 - -
Spst9g00153 460 Pfam X8 domain 372 442 IPR012946 -
Spst9g00153 460 Pfam Glycosyl hydrolases family 17 30 344 IPR000490 GO:0004553|GO:0005975
Spst9g00153 460 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Spst9g00153 460 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 444 IPR044965 GO:0004553|GO:0005975
Spst9g00153 460 FunFam glucan endo-1,3-beta-glucosidase 7 367 456 - -
Spst9g00153 460 Gene3D - 368 457 - -
Spst9g00153 460 Gene3D Glycosidases 29 354 - -
Spst9g00153 460 SUPERFAMILY (Trans)glycosidases 30 345 IPR017853 -
Spst9g00153 460 SMART X8_cls 371 455 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00153 Spst-Chr9 1314085 1317770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00153 24 455 Miscellaneous Gene Families AT2G16230 66.207 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00153 - - gmx:100778892 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00153 9 1314085 1317770 Spst9g00153 9 1314085 1317770 ECH