Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00149 ATGGACAGGGACACCAAGGCAACCTCGACCGCAACCGCAACATCAGAGGAGTCGAAAAAGAGGTTGCCGAATTTTTTGCAGAGCGTAAAGCTGAAGTATGTGAAACTGGGGTACCACTACCTGATGTCACACCTGGTGACCCTGTGCCTGCTCCCTCTGATGTCCGTAATCCTCCTCCAAGCCTCTCAGATGAAGGCGCAGGACATTCAGGAGCTGTGGGGCCACCTCCAGTACAACCTCCTCAGCGTCATCGCTATCTCCGCCATCCTCGTCTTGGGATCCACCCTATACATCATGACCCGCCCCACATCCATCTACCTGATCGACTTCTCCTGTTACCGTCCTCCCCACCACCTCCACGTCCACTTCCAACGGTTCCTCCATCACTCCACCCTCACTGGCGACTTCACCCCCTCATCCCTCGAATTTCAGCGCAAGATTCTCCTCCGCTCGGGGCTCGGCGAGGAAACCTATGTCCCCGAGGCTATGCACTCCATCCCTCCGCGCCCTTCCATGGCCGCAGCCAGGGAAGAGGCTGAGCAGGTCATGTTCGGCGCCCTTGACAACCTCTTTGCAAACACCCACATCAAACCCAAGGACATCGGAATTATCGTCGTCAATTGCAGTCTCTTCAACCCTACGCCCTCCCTTTCCGCCATGATCATCAACAAGTACAAGCTCCGGGGCAATATCAAAAGCTTCAACCTTGGAGGCATGGGCTGCAGCGCCGGTGTCATTGCCATCGATCTAGCCAAAGACATGCTTCAGGTCCACCGCAACACTTACGCAGTTGTCGTCAGCACCGAGAACATCACTCAGAATTGGTATTTCGGGAACAACAAGGCCATGTTGATACCCAACTGTCTCTTCCGCGTTGGTGGTGCCTCCATTCTTCTCTCCAACAAAAGCTCCGACAAAAGACGAGCCAAATACAAGCTTTTGCATGTGGTTAGGACTCACAAAGGTGCAGATGACAAGGCCTTTAGGTGCGTGTACCAGGAACAAGATGACGTCGGAAAAATCGGGGTGTCTTTGTCAAAGGATCTCATGGCCATTGCAGGTGGGGCTCTTAAGACTAACATAACCACATTGGGTCCCCTTGTGTTGCCTATAAGTGAGCAACTTCTCTTCTTTCTCACACTCGTTGTGAAGAAGCTTTTCATCGCCAAGATGAAGCCTTACATCCCCGATTTCAAGCTCGCGTTTGACCATTTCTGCATTCATGCTGGTGGGAGGGCTGTGATCGATGAGCTGGAGAAGAATCTGCAGCTTCTGCCACTGCATGTGGAGGCTTCCAGAATGACGCTGCACAGGTTCGGAAACACCTCTTCAAGTTCGATTTGGTACGAGTTAGCTTACACTGAGGCGAAGGGGAGGATGAGAAAGGGACACAAAGTGTGGCAGATTGCTTTTGGGAGTGGGTTTAAGTGTAACAGTGCGGTGTGGGAAGCCCTCAGACATGTGACCCCCTCCCCCAAGAGTCCCTGGGAAGATTGCATTCATAGGTACCCGGTTCAGATTGAGTAG 1527 0.5278 MDRDTKATSTATATSEESKKRLPNFLQSVKLKYVKLGYHYLMSHLVTLCLLPLMSVILLQASQMKAQDIQELWGHLQYNLLSVIAISAILVLGSTLYIMTRPTSIYLIDFSCYRPPHHLHVHFQRFLHHSTLTGDFTPSSLEFQRKILLRSGLGEETYVPEAMHSIPPRPSMAAAREEAEQVMFGALDNLFANTHIKPKDIGIIVVNCSLFNPTPSLSAMIINKYKLRGNIKSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNNKAMLIPNCLFRVGGASILLSNKSSDKRRAKYKLLHVVRTHKGADDKAFRCVYQEQDDVGKIGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFLTLVVKKLFIAKMKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPLHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGHKVWQIAFGSGFKCNSAVWEALRHVTPSPKSPWEDCIHRYPVQIE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00149 508 SUPERFAMILY Thiolase-like 313 486 IPR016039 GO:0016746
Spst9g00149 508 Gene3D - 133 484 IPR016039 GO:0016746
Spst9g00149 508 Pfam FAE1/Type III polyketide synthase-like protein 97 386 IPR013601 GO:0006633|GO:0016020|GO:0016747
Spst9g00149 508 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 402 483 IPR013747 -
Spst9g00149 508 FunFam 3-ketoacyl-CoA synthase 115 484 - -
Spst9g00149 508 CDD CHS_like 87 482 - -
Spst9g00149 508 PIRSF Very_long_ch_3-ktacl-CoA_syn 24 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Spst9g00149 508 PANTHER 3-KETOACYL-COA SYNTHASE 72 506 IPR012392 GO:0006633|GO:0016020|GO:0016747
Spst9g00149 508 SUPERFAMILY Thiolase-like 91 308 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00149 Spst-Chr9 1243199 1244725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00149 20 507 Miscellaneous Gene Families AT1G19440 80.943 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00149 K15397 - qsa:O6P43_011591 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00149 9 1243199 1244725 Spst9g00149 9 1243199 1244725 ECH