Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00143 ATGCAATCTCGGAAAATAGCGGAAGTGTTGAACGTCTCGGACGGTGGGTTAGACAAGGAAAAGGACTTCACTTCAAGCCTCCACAATGATGATAGACAACACGTACAGATTGATTCTGGCACCGCCCTCCAACAATTTCTTGATCACGTACCCATTAGTTCGATAGCTGGCATAAAAAACTCACCTGTTTTGGAATTGAAAGCTGGAGACAGTATAAGGGATGCAATTCATATGTTGTACGAAAAGGACATCTTTTCTGCGGCAATTGTTGATATGGTAGACTCCCATATGAATAGCATAAAGTTTTCAGATCGGTACATGGGTCTCATTGATTTTACAAGCATGGTTCTTTGGTGCCTTGAGGTTAGCGAGTTGGCTAAGTCATTCCTCTGGGAACCATTTTTCCCAGTAAACTTGGACGATACGGTTTTTCATGCACTGCTACTTCTCTCTAAGCACCAGGTGCACGTTTTGCCGGTCATACAGCAACGTGAAGATGGACTCATCGGTTTTGTTACACAGACTGCAGTAGTCCAACACCTTCTTCAATATAGTGAACTAGAGTGGTTTGACAGCATTGCAGATAAGAACTTGTCAGATTTGCGATTTGAAGGCCTACAAAATCCTAGTTGTGTATTTGCGGACCAAACTGTTGCAGATGCTTTAAAGTCGCTCTGGCAAAACCAAACTAGTGCAGTAGCGGTTGTAGATCGAGAAACTAAGAAGCTCCTAGGCAATGTGAGGAAAAGTGATGTTTATATTCTTGTAAGGAATAATGACCTCCTTAGAAATAGAACGATTTTAACTGTGGGGGAATTCATTCAAATAGAGACTGACAAAGCAAAAACTAAGCCAAAAATTGAACATGATCATGGAGCTTTTCTCACAGCCGGAAGTCTTCGGCTCAAAAACAGCTTCACACCCAGAATGGACTTCCCCGTTGCCAGCAAGGAAAATTCCACGCTCAAGCAAATAATGGAGCATACCATAGAGACTAACACCAATTTTACCTTTCTGACCAATGATAAGGAGCAAGTTACAGGTTTGCTCACACTGAGAGATATAATTCTGCAGTTTGCCCCCCCATGTGTTAATTCTACCATTAATGGAGGTGGCTTTTTTGAATTTGCCTTGGAGCAAAGTGGATGTCAAGTGAAAAATGGAACTATGATTCGTAATCATTGA 1185 0.4177 MQSRKIAEVLNVSDGGLDKEKDFTSSLHNDDRQHVQIDSGTALQQFLDHVPISSIAGIKNSPVLELKAGDSIRDAIHMLYEKDIFSAAIVDMVDSHMNSIKFSDRYMGLIDFTSMVLWCLEVSELAKSFLWEPFFPVNLDDTVFHALLLLSKHQVHVLPVIQQREDGLIGFVTQTAVVQHLLQYSELEWFDSIADKNLSDLRFEGLQNPSCVFADQTVADALKSLWQNQTSAVAVVDRETKKLLGNVRKSDVYILVRNNDLLRNRTILTVGEFIQIETDKAKTKPKIEHDHGAFLTAGSLRLKNSFTPRMDFPVASKENSTLKQIMEHTIETNTNFTFLTNDKEQVTGLLTLRDIILQFAPPCVNSTINGGGFFEFALEQSGCQVKNGTMIRNH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00143 394 Gene3D - 192 360 IPR046342 -
Spst9g00143 394 SMART cbs_1 208 257 IPR000644 -
Spst9g00143 394 SMART cbs_1 133 182 IPR000644 -
Spst9g00143 394 ProSiteProfiles CBS domain profile. 130 188 IPR000644 -
Spst9g00143 394 ProSiteProfiles CBS domain profile. 205 262 IPR000644 -
Spst9g00143 394 CDD CBS_pair_SF 132 252 - -
Spst9g00143 394 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 42 359 - -
Spst9g00143 394 SUPERFAMILY CBS-domain pair 207 356 IPR046342 -
Spst9g00143 394 Pfam CBS domain 127 182 IPR000644 -
Spst9g00143 394 SUPERFAMILY CBS-domain pair 42 183 IPR046342 -
Spst9g00143 394 CDD CBS_pair_SF 60 179 - -
Spst9g00143 394 Gene3D - 31 187 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00143 - - gmx:100819351 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00143 9 1207178 1209342 Spst9g00143 9 1207178 1209342 ECH