Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00107 ATGCCTGGGATTTCGTTTTACCTTGATTCCCTTTGGTGTGACCGTTATTGGCTCTTCTCAGGGGAGGTAGGGGGTTTGGCTTGGCTAGTTGGCTTAAGGATGATATTGGATGTTGGTTGTGATGTGGACAGGAAGGAGGCGGTGAAAATGAGTTCAGACAGCCGCAGCAGGAGCAGGAGCAGGAGCCCAATGGACCGTAAGATCCGATCTGATCGATTTTCCTATCGTGATGCACCTTACAGGAGAGATTCACGTCGGGGTTTCAGCCGAGACAATCTCTGCAAGAACTGCAAGAGGCCTGGTCATTATGCAAGAGAATGCCCTAATGTTGCAATTTGCCACAACTGTGGCCTCCCTGGGCACATTGCTTCTGAATGTACCACGAAGTCACTGTGCTGGAACTGTAAAGAACCTGGCCACATGGCCAGTAATTGTCCAAATGAGGGCATTTGCCACACCTGTGGTAAAGCTGGACACCGTGCCAGGGAATGCACTGCTCCTCCAATGCCTCCTGGAGACTTAAGGTTGTGCAACAACTGTTATAAGCAGGGCCACATTGCAGCTGAATGTACGAATGAGAAGGCATGCAACAACTGTAGGAAGACAGGCCACTTGGCACGGGATTGTCCTAATGATCCTATTTGTAACTTGTGCAATGTTTCTGGGCATGTGGCTAGACAGTGTCCAAAAGCCAATGTTCTTGGAGATCGGAGTGGTGGTGGGGGTGGTGGAGGCACTCGTGGTGGTGGGGGTGGGGGTTACCGGGATGTTATTTGCAGGAACTGCCAGCAATTAGGTCACATGAGTAGGGATTGCATGGGCCCCTTGATGATTTGCCACAATTGTGGAGGTCGTGGTCACCTAGCATACGAGTGCCCTTCAGGTCGGTTTATGGATCGCTACCCCAGGAGGTATTGA 918 0.5109 MPGISFYLDSLWCDRYWLFSGEVGGLAWLVGLRMILDVGCDVDRKEAVKMSSDSRSRSRSRSPMDRKIRSDRFSYRDAPYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKEPGHMASNCPNEGICHTCGKAGHRARECTAPPMPPGDLRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGGGTRGGGGGGYRDVICRNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 132 147 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Gene3D - 194 243 - -
Spst9g00107 305 Gene3D - 149 193 - -
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 215 230 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 196 211 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 94 109 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 112 128 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 278 294 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 176 192 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 258 274 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 150 166 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 214 230 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 195 211 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 93 109 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SMART c2hcfinal6 131 147 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SUPERFAMILY Retrovirus zinc finger-like domains 130 168 IPR036875 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 259 272 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 113 126 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Gene3D - 254 296 - -
Spst9g00107 305 Gene3D - 49 128 - -
Spst9g00107 305 Pfam Zinc knuckle 113 127 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 150 165 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 214 230 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 258 272 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 93 109 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 278 294 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 132 147 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 Pfam Zinc knuckle 195 211 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 177 192 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SUPERFAMILY Retrovirus zinc finger-like domains 85 129 IPR036875 GO:0003676|GO:0008270
Spst9g00107 305 PANTHER - 51 300 - -
Spst9g00107 305 SUPERFAMILY Retrovirus zinc finger-like domains 171 212 IPR036875 GO:0003676|GO:0008270
Spst9g00107 305 Gene3D - 129 148 - -
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 151 164 IPR001878 GO:0003676|GO:0008270
Spst9g00107 305 SUPERFAMILY Retrovirus zinc finger-like domains 248 296 IPR036875 GO:0003676|GO:0008270
Spst9g00107 305 ProSiteProfiles Zinc finger CCHC-type profile. 279 294 IPR001878 GO:0003676|GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00107 K09250 - gmx:100803820 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00107 9 782914 786947 Spst9g00107 9 782914 786947 ECH