Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00102 ATGGCCTCTGCTTCTGCTACTCTTCTCAAGTCATCTCCTGTTCTCGACAAGTGCGAGTGGGTCAAAGGTCAGACCCTTCGCCAGTCTCCAGTGTCTGTTGTGAGATGCAACCCCGCTTCAGCATCAGCTCTCACCATCCGAGCTGGTTCCTATGCTGATGAGCTCGTCAAAACCGCGAAAACAGTTGCCTCACCTGGGCGTGGTATTTTGGCCATGGATGAGTCAAATGCAACCTGCGGGAAGCGTTTGGCATCAATTGGGTTGGAGAACACTGAGGCTAACCGCCAGGCATACCGTACCCTACTCGTCACAGCACCTGGTCTTGGTCAATACATCTCTGGTGCCATTCTCTTTGAGGAAACTCTCTACCAATCAACTGTTGATGGAAGGAAGATCGTTGACATCCTTCTTGAGCAGAACATTGTCCCTGGTATTAAGGTCGACAAGGGTTTGGTGCCCCTGGCTGGTTCCAATGATGAGTCGTGGTGCCAAGGTCTGGATGGTCTTGCGTCTCGCTCAGCTGCATACTACCAGCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTTTGGCAGTCAAGGAGGCTGCCTGGGGTCTAGCTCGCTATGCTGCCATTTCACAGGACAATGGGTTGGTCCCAATTGTGGAGCCAGAGATCTTGCTTGATGGTGAGCATGGAATTGACAGGACATTCGAAGTAGCTCTAAAGGTGTGGGCTGAGGTCTTCTTCTACCTTGCTGAGAACAATGTCCTGTTCGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAGCTGAGTCCAAGAACAAGGCCACTCCTCTGCAAGTTTCTGACTACACCCTCAAGCTCCTCCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCTTGAACCTGAATGCGATGAACCAGTCTCCAAACCCATGGCACGTGTCCTTCTCCTACGCCAGAGCCCTCCAAAACACCTGCTTGAAGACATGGGGAGGTCGCCCAGAGAACGTGAAAGCAGCACAAGACGCACTTCTTTTCCGTGCCAAGTCCAACTCTCTCGCTCAGCTTGGAAAGTACACTGGAGAGGGTGAATCTGAGGAAGCCAAAAAGGGAATGTTCGTAAAAGGCTACTCCTACTAA 1197 0.5188 MASASATLLKSSPVLDKCEWVKGQTLRQSPVSVVRCNPASASALTIRAGSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGRKIVDILLEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVALKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKNKATPLQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDALLFRAKSNSLAQLGKYTGEGESEEAKKGMFVKGYSY 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00102 398 Pfam Fructose-bisphosphate aldolase class-I 54 398 IPR000741 GO:0004332|GO:0006096
Spst9g00102 398 SUPERFAMILY Aldolase 45 398 - -
Spst9g00102 398 Gene3D Aldolase class I 33 397 IPR013785 -
Spst9g00102 398 NCBIfam fructose-bisphosphate aldolase class I 54 374 - -
Spst9g00102 398 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 49 398 IPR000741 GO:0004332|GO:0006096
Spst9g00102 398 CDD FBP_aldolase_I_a 52 378 - -
Spst9g00102 398 FunFam Fructose-bisphosphate aldolase 36 397 - -
Spst9g00102 398 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 259 269 IPR029768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00102 Spst-Chr9 750237 752041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00102 51 398 Miscellaneous Gene Families AT3G52930 55.682 4.46e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00102 K01623 - gmx:100798677 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00102 9 750237 752041 Spst9g00102 9 750237 752041 ECH
Spst9g00102 9 750237 752041 Spst2g02591 2 25652312 25654658 ECH