Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00096 ATGCAGTTTTTTGACGGATATGGGTATCACGGGACATCATTTGAACAGACATATCGATGCTACTCTGCTTCATTTATTGAAAAGCCCCAAATTGAAAATGGTGATAGAATTATAATGCCTCCTTCAGCCCTTGATCATTTAGCATTTCTACGGATTGATTATCCTATGATGTTCGAACTCAGAAATGGTGCTTCTGAGCGGGTTTCTCATTGTGGGGTTCTGGAGTTCATTGCTGATGAAGGAGCTATATATATGCCATACTGGATGATGCAGAATATGCTTTTGGAAGAGGGAGATACCGTAAGAGTGAAATATGCATCACTTCCAAAGGGAACATATGTTAAATTACAACCCCACACAAAGGATTTTTTTGATATTTCCAATCCAAAAGCTATCTTAGAGACCACTTTGAGAAAATTTTCGTGCTTGACTACTGGAGATACTATCATGGTGACGTACAACAACAAAAGGTATTACTTAGATGTTGTAGAAACAAAGCCTGCTAATGCTATCAGCATCATCGACACAGACTGTGAGGTGGACTTTGCTCCTTCCTTGGACTACAAGGATTTTGGAAAGCCTATTACTGGAGGCAAAACACAAGATAAAGGCAAATTCAATCAATTTTTTGGGACTGGAAGACGCTTGGATGGAAAACCAAATCCTCCCATTTATTCATCATGGCATGAAGAGAAAGGAGCTGAAGTTCCAGGTTTGAACGCACAGTCTTCCACGACATCTACTTCATCAAATTTTACTCGTCCATACGAGGGAAAGCTAGTTTTTGGATCAAACTTTTACCGTACAAAACAAACAGGAAAGGAAAAGATCGAGCCCAAACAAGAGCCACCCCATCAGAAGCAACCAAAATTTCAGCCTTTCATTGGGAAGAAGTATTCCCTAAGGGGTTGA 912 0.4002 MQFFDGYGYHGTSFEQTYRCYSASFIEKPQIENGDRIIMPPSALDHLAFLRIDYPMMFELRNGASERVSHCGVLEFIADEGAIYMPYWMMQNMLLEEGDTVRVKYASLPKGTYVKLQPHTKDFFDISNPKAILETTLRKFSCLTTGDTIMVTYNNKRYYLDVVETKPANAISIIDTDCEVDFAPSLDYKDFGKPITGGKTQDKGKFNQFFGTGRRLDGKPNPPIYSSWHEEKGAEVPGLNAQSSTTSTSSNFTRPYEGKLVFGSNFYRTKQTGKEKIEPKQEPPHQKQPKFQPFIGKKYSLRG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00096 303 Pfam Ubiquitin fusion degradation protein UFD1 14 184 IPR004854 GO:0006511
Spst9g00096 303 Gene3D - 7 108 IPR042299 -
Spst9g00096 303 MobiDBLite consensus disorder prediction 210 256 - -
Spst9g00096 303 FunFam Ubiquitin fusion degradation protein 1 homolog 4 109 - -
Spst9g00096 303 MobiDBLite consensus disorder prediction 271 303 - -
Spst9g00096 303 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 10 303 IPR004854 GO:0006511
Spst9g00096 303 FunFam ubiquitin fusion degradation protein 1 homolog 110 184 - -
Spst9g00096 303 Gene3D - 110 183 - -
Spst9g00096 303 MobiDBLite consensus disorder prediction 271 285 - -
Spst9g00096 303 MobiDBLite consensus disorder prediction 238 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00096 Spst-Chr9 722333 725539 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00096 K14016 - gmx:100795133 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00096 9 722333 725539 Spst9g00096 9 722333 725539 ECH