Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00086 ATGGCTAGAAGGAAAATATCTGGTGTTGCCTTGTTGGTGTTGGTTTGCTTGGTACCTCTGCATCTGATCTTGGAAGTGAAGTGTAGTGATAGCAATGGTTCAGCCCGGAGTGGTTGCATCATGTCCCTGTCCGAATCCCTATCCTTGGAGCCATCACTTCTCCGCCGCAGGAACAGGCAGAGTGACAGTGAGGGTGACCCCATTGCCAATTCTGAGAGGGAAGGCGGTTGTTGGTTCCGGAATAAGTATGCTATTCTTCCCGAAACCTCCTTGGGAGCCGACCGTTATCTCTCCTCCCTTACCACCATCACTGATGTCCAAGTCTCCGGTGATTTGCAGGTGGTTAAGGTGTTTGTGTCTGTTTTTGGGGATGAAAGAGGGAAAGAAGTAGCCATTGCTGGCTTGAAATCAAAGGCTAAATATGTTCGCAGTGTGTTGGGGAAGCGTATGAAGTTGCGCTTAACTCCCGAGATACGATTTATAGAGGATGATTCTTTTGAGAAAGGAAGCAGGGTGATTGCAATATTAGATAAAATAAAGGATGAGAAGAGATCAGGGAGTCAAAACAAGGAGCAGTTGGATTCATCAACTAATGAGGATGACGATGATTGGGATGGGGAAGATCCTGAAGAGGGTGTCATTTATGTGGAATAG 654 0.4664 MARRKISGVALLVLVCLVPLHLILEVKCSDSNGSARSGCIMSLSESLSLEPSLLRRRNRQSDSEGDPIANSEREGGCWFRNKYAILPETSLGADRYLSSLTTITDVQVSGDLQVVKVFVSVFGDERGKEVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDDSFEKGSRVIAILDKIKDEKRSGSQNKEQLDSSTNEDDDDWDGEDPEEGVIYVE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00086 217 Pfam Ribosome-binding factor A 94 175 IPR000238 GO:0006364
Spst9g00086 217 MobiDBLite consensus disorder prediction 182 217 - -
Spst9g00086 217 Hamap Ribosome-binding factor A [rbfA]. 79 176 IPR000238 GO:0006364
Spst9g00086 217 MobiDBLite consensus disorder prediction 196 217 - -
Spst9g00086 217 Gene3D - 83 185 IPR015946 -
Spst9g00086 217 SUPERFAMILY Ribosome-binding factor A, RbfA 93 179 IPR023799 -
Spst9g00086 217 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 82 217 IPR000238 GO:0006364
Spst9g00086 217 ProSitePatterns Ribosome-binding factor A signature. 142 163 IPR020053 GO:0006364
Spst9g00086 217 NCBIfam 30S ribosome-binding factor RbfA 99 181 IPR000238 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00086 K02834 - gmx:100812407 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00086 9 667914 669322 Spst9g00086 9 667914 669322 ECH