Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00074 ATGGAGAGTAAGTCAGGGAGCAGCAAGAGGAAAAATGGTGGGAAGGGAGAGATTGTGGATGGTTCCAAGATTATGGAGTTGGTTGGAAACGAGCAAGTTTTCAGCAACTTTGTGAACAATAAGTTTGATGAGTTGGATAAGGACAGAGATGGGAAACTCTCCATGAAGGAGCTTGAACCTGCTGTTGCTGACATCGGTGCTGGTCTTGGTTTGCCTGCTCAAGGCACTAGTCCTGATTCAGATCACATTTATTTTGAGGTCTTGAATGAGTTCACCCATGGCAAGCAAGAAAAAGTAAGCAAGATGGAGTTCAAAGAGGTTCTCTCAGACATTCTTTTGGGCATGGCTGCTGGACTAAAGCGAGACCCAATTGTTATACTCCGCATGGATGGGGAAGATCTCCTTGAGTTTGTCACTGGTCCAAGTTATGAGGCAGAAATGGCATCCATTTTCTCTCAGATTGAGTCCCCTAGTGGATCACTTCGTGAACATGTAATTGAAGCTTTTGGGAGACTCACTGTTGAGGAAGGAATTCCTCCCACATCAGATTCTTGGGTTTTCAACAACATTGTGGATCCAGCACTGTCTCAAGCTGGGCCTGCCTTGGACAATCCTGCTGCTCAGGAGACATTTTTGGAAGAATTTAAGAAAGTGGTATTCAGTGTGGTTGATTTTCTTAAAGAGAAACCTGTCATTGTTGCCCACAGTGAAAACACATTTGATGGACGCGGCGTTAAGAGACTTTTATCCAACAAGTTTGAACTAGAAAGGACGTTGAACTTGGCTTTAGAGAATCTGCCAAAAGATCGCAATGGAAAAATATCGAAGGATTATCAGCGGGTGGCACTAGATCTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGCGCAATTGAAGAGATGGATAAAGTTATTGTTGAAGCCTTTAAGATGGGGAATGCGGATGACAAAAACACGGTTACAGAAGTCGAATTCAAGAAAATTTTAACTGAAATTCTGGGGAGTATCATGTTGCAGTTAGAGGGCAGTCCAATATCCGTTTCTTCAAATTCAGTTGTGCATGAGCCTTTAGGCTCATCTTCAACATTCTTGCAGCCATCTTCTAGTGAAACAGCATAA 1119 0.4334 MESKSGSSKRKNGGKGEIVDGSKIMELVGNEQVFSNFVNNKFDELDKDRDGKLSMKELEPAVADIGAGLGLPAQGTSPDSDHIYFEVLNEFTHGKQEKVSKMEFKEVLSDILLGMAAGLKRDPIVILRMDGEDLLEFVTGPSYEAEMASIFSQIESPSGSLREHVIEAFGRLTVEEGIPPTSDSWVFNNIVDPALSQAGPALDNPAAQETFLEEFKKVVFSVVDFLKEKPVIVAHSENTFDGRGVKRLLSNKFELERTLNLALENLPKDRNGKISKDYQRVALDLVSPSAGLPPVGAIEEMDKVIVEAFKMGNADDKNTVTEVEFKKILTEILGSIMLQLEGSPISVSSNSVVHEPLGSSSTFLQPSSSETA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00074 372 Gene3D - 10 120 - -
Spst9g00074 372 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
Spst9g00074 372 SMART efh_1 37 65 IPR002048 GO:0005509
Spst9g00074 372 SMART efh_1 304 332 IPR002048 GO:0005509
Spst9g00074 372 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Spst9g00074 372 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 17 127 - -
Spst9g00074 372 SUPERFAMILY EF-hand 41 341 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00074 Spst-Chr9 587840 591397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00074 1 371 EF-hand Containing Proteins AT4G38810 63.733 9.60e-168 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00074 - - gmx:100787083 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00074 9 587840 591397 Spst9g00074 9 587840 591397 ECH