Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00070 ATGAGGGGTGCGAGAAAATCGATCCACGCTATCATCACATGGGTGCGGCGGCAGCCACCGAAGATGAAGGCTTTTATCGCTGTCGTATCCAGCATGGTGGCTCTCGTCCTTCTCCGCATTATTGTTCACGATCACGACAATCTTTTCGTCGCCGCCGAGGGTGTTCATTCTCTTGGAATCTCTGTTCTCATCTACAAGCTCATCAAAGAAAGAACTTGTGCCGGATTATCACTCAAATCCCAGGAATTGACAGCTCTGTTTTTAGCTGTCAGGCTGTACTGCAGTTTTGTCATGGAATATGATATACACACCGTGCTTGATTTGGCTACTTTTGTAACAACAGTGTGGGTTATATACATGATTCGTTTTAAATTGAGGTCTAGTTACATGGAGGAGAAAGACAATTTTGCTCTATACTATGTGGCGGTACCCTGTGCTGCGTTAGCCTTGTTTGTTCATCCATCAACTTCACATCATTTATTGAACAGGATTTTCTGGGCATTCTGTGTATATCTTGAAGCTGTGTCAGTACTGCCCCAACTGCGAGTCATGCAGAATACCAAAATTGTAGAGCCATTCACGGCACATTATGTATTTGCCTTGGGTGTAGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTAGATAGTCGTGGACATTTGTTGGTTGCTTTGGGGTATGGATTATGGCCGTCAATGGTACTTATTTCAGAAATTGTGCAGACATTTATCTTAGCAGATTTCTGTTACTATTATGTCCAAAGTGTTTTCGGGGGACAGCTTGTTCTCCGCCTACCTTCTGGTGTGGTGTGA 819 0.4408 MRGARKSIHAIITWVRRQPPKMKAFIAVVSSMVALVLLRIIVHDHDNLFVAAEGVHSLGISVLIYKLIKERTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTVLDLATFVTTVWVIYMIRFKLRSSYMEEKDNFALYYVAVPCAALALFVHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVQSVFGGQLVLRLPSGVV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00070 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 48 270 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016020|GO:0046923
Spst9g00070 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016020|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00070 Spst-Chr9 549682 551563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00070 1 272 Miscellaneous Gene Families AT4G38790 83.516 1.76e-173 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00070 - - cave:132161628 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00070 9 549682 551563 Spst9g00070 9 549682 551563 ECH