Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00055 ATGAAAGACATCATCCACTTCTCTGTCCTTATACTTTTCTTCCTTCTCATACGGCCTTCTTTGGTTTCTCCTCTATATGATGGGCCCCTATATGACTCCACTGCCTACACTGAGTGCAAAGAGAAGCCAGGGAAGCCACTTTATGGAGGAGGAGTTCTCAAGAGTGACCAACAGTCTCCTCGTGGTGTTCAAGACAGCATTTACTCATCGTATGTTGTCAACAACAGCTATGTGCCTTCACTAGTTCTATATAATCTCACTCAGGGCAACATTCACACTTTTTCTGCATGGGTGAGAATTAAAGATTCAAGTTCAGCTATGATAAAGGCTACCCTGGAAACAGAGAAAGAGACTTCTGATTGCATCGGGACAGTTTCAGCCAAGCTTGGATGCTGGTCATTTCTGAAGGGTGGTTTCGTTCTGAATTGGCCTTCAAATTTATCCATCATATTCTTCCAGACCGCGGATGGTAAAGACGTCAATATAGAAGTTGCTAGCCCATCACTCCAGCCATTTACTAAGCAACAATGGAGAATCAATCAACAGTATATAATCAACACTAAAAGAAAGCGTGCCGTCACTATTCATGTGTCAGATAGTAACGGAAGAAGATTGCAAGGAGCTTCCATCAGTATAGAGCAAATCTCAAAAGACTTCCCTTTTGGATCTGCGATAGCAAAGACCATTCTTGGCAACGTCCCCTACCAGAATTGGTTTGTGAAACGATTCAATGCTGCGGTCTTTGAAAATGAGCTCAAATGGTACGCCACAGAACCTGATAAAGGCAAGGTCAATTACTCCATTTCAGACCAAATGCTACAGTTCGTGAGAACAAACAATATCGTAGCTAGAGGGCACAACATATTTTGGGAAGACCCTAAATACAATCCTCCATGGGTTCTTAACCTTACTGGAACCCAGTTACACTCTGCTGTGAATTCCCGCATACACAGTCTCATGAGCCAATACAAAGATGAGTTCATACATTGGGACGTCAGCAATGAAATGCTCCATTTTGATTTCTATGAGCAAAGGCTTGGACCTGATGCCACATTACATTTCTTTAAGACTGCACATAAATCAGACCCATTATCAACCCTGTTTATGAACGACTTCAATGTTGTGGAAACATGCAGTGATGTGAATTCCACTGTAGACGTCTATATCTCACGGTTAAGAGAACTGCAGCGAAATGGCATCTTTATGGATGGAATTGGCTTGGAGGGGCACTTCACAATACCCAATCCTCCCCTTATCAGAGCCATCCTAGACAAGTTGGCAACACTTGGACTTCCCATTTGGCTTACGGAGGTTGACATAAGCAAGACAAATGATAGAGATTCACAGGCAAATTATTTGGAGGAAGTGCTGAGGGAAGGGTTCTCACATCCTTCTGTGAATGGGATAATGCTGTGGACTGCATATCATCCAAATGGGTGCTACCAAATGTGCCTCACAGACAATAATTTCAAAAACCTGGCAGCAGGTGATGTGGTGGACAAACTTCTTGGAGAGTGGGAAACAGGTCGTGTTGAGGGAGTGGCAGATGTGCATGGTTCCTATAGCTTTTATGGATTCTTAGGAGAATATTCAATTACTGTCAACTATGGCAACAGGACTACACATTCAACATTCTCCCTCTCTGGAGGTGAAGAAGCTAGACATTTCACCATTACACTGTGA 1683 0.4302 MKDIIHFSVLILFFLLIRPSLVSPLYDGPLYDSTAYTECKEKPGKPLYGGGVLKSDQQSPRGVQDSIYSSYVVNNSYVPSLVLYNLTQGNIHTFSAWVRIKDSSSAMIKATLETEKETSDCIGTVSAKLGCWSFLKGGFVLNWPSNLSIIFFQTADGKDVNIEVASPSLQPFTKQQWRINQQYIINTKRKRAVTIHVSDSNGRRLQGASISIEQISKDFPFGSAIAKTILGNVPYQNWFVKRFNAAVFENELKWYATEPDKGKVNYSISDQMLQFVRTNNIVARGHNIFWEDPKYNPPWVLNLTGTQLHSAVNSRIHSLMSQYKDEFIHWDVSNEMLHFDFYEQRLGPDATLHFFKTAHKSDPLSTLFMNDFNVVETCSDVNSTVDVYISRLRELQRNGIFMDGIGLEGHFTIPNPPLIRAILDKLATLGLPIWLTEVDISKTNDRDSQANYLEEVLREGFSHPSVNGIMLWTAYHPNGCYQMCLTDNNFKNLAAGDVVDKLLGEWETGRVEGVADVHGSYSFYGFLGEYSITVNYGNRTTHSTFSLSGGEEARHFTITL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00055 560 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 206 502 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 Gene3D - 45 165 - -
Spst9g00055 560 SUPERFAMILY (Trans)glycosidases 204 510 IPR017853 -
Spst9g00055 560 Gene3D Glycosidases 208 512 - -
Spst9g00055 560 PANTHER GLYCOSYL HYDROLASE 80 549 IPR044846 GO:0004553|GO:0005975
Spst9g00055 560 PRINTS Glycosyl hydrolase family 10 signature 327 338 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 PRINTS Glycosyl hydrolase family 10 signature 398 410 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 PRINTS Glycosyl hydrolase family 10 signature 283 295 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 PRINTS Glycosyl hydrolase family 10 signature 365 376 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 SMART glyco_10 252 503 IPR001000 GO:0004553|GO:0005975
Spst9g00055 560 Pfam Glycosyl hydrolase family 10 214 474 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00055 Spst-Chr9 443030 445728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00055 27 560 Glycoside Hydrolase AT4G38650 63.941 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00055 - - vra:106762624 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00055 9 443030 445728 Spst9g00055 9 443030 445728 ECH