Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00045 ATGGAAACTCGGAGTCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCCTCTTCCACCACTCGTTCCGCCAAGCGCTCTCGTCTTTCTTCTTCGATCCCAAACACCCCATCTGTTAATACCCGTTCTCGTTCGGTCAGGACTAACACCACCACCACCAACAACAACTCCGTTTCTCTCATGGACCCCACCATTGAATCCTCCGGGTCAAGACGTGATCGCCGCGGCAAGAATTTGGAAAGGGACAATTCGGACAAAGGGAAGGAGAAGGAACAGGATGTTAGGATTAGGGATGTTGAAAGAGAGCGAGCTTTGGCGTTGAACATGGAGAGTGAAGGTGTCGGGGACGACGATGATAATGATAGTGAGGGTGGTTTGCATCAGAATTTAACGTCTGCTAGTAGTGCCCTTCAAGGGCTTCTTCGTAGACTTGGTGCTGGTTTGGATGATCTGCTTCCTGCCACGGCTATGGGTGGTTCTGCGTCCTCTTCTTATCAGAGTGGTAGACTCAAGAAAATTCTGGCTGGATTGCGTGCTGACGGAGAAGAAGCTCGTCAGCTCGAGGCATTATCGCAGCTTTGTGACATGCTTTCCATTGGCACCGAAGAATCCCTTAGTACATTTTCGGTTGACTCGTTTGTTCCTGTGCTAGTTGGGTTGCTTAATCATGAGAGCAATCCCGATGTTATGCTACTTGCGGCCAGGGCGCTAACTCACTTATGTGACGTTCTTCCCTCATCCTGTGCTGCGGTTGTGCATTATGGTGCAGTGTCTATCTTCTGTGCAAGACTGCTTACGATAGAGTATATGGACTTGGCTGAGCAGTCTCTTCAAGCGCTAAAGAAGATTTCACAGGAGCACCCAACTACCTGTCTTCGAGCTGGAGCTCTGATGGCTGTTCTTTCTTACTTGGACTTCTTCTCAACGGGAGTTCAGCGGGTAGCATTGTCCACTGCTGCAAATATGTGCAAGAAGCTTCCACCTGATGCAGCTGATTTTGTAATGGAAGCAGTTCCTCTTTTGACAAACCTTCTTCAGTACCATGACTCCAAGGTACTGGAGCATGCCTCTATTTGTCTGACTCGAATTGCTGAAGCATTTGCATCATCTCCTGACAAATTAGATGAATTGTGCAATCATGGACTTGTTACGCAAGCTGCCTCTCTCATTTCTACCAGCAGTTCTGGAGGTGGACAGGCTTCTCTCAGCACCCCTACATATACTGGTCTGATCCGCCTTCTTTCCACATGTGCCAGTGGATCCCCTCTTGGAGCCAAAACACTACTTCTCCTTGGAATTAGTGGCATTCTTAAAGATATACTATCCGGTTCTGGTGTTTCTTCTAACAACTCTGTTTCACCTGCATTAAGTAGGCCTGCAGATCAGATATTTGAGATTGTGAATCTGGCAAATGAACTTCTGCCCCCGTTGCCACATGGAACCATTTCCCTTTCTGTCAGCTCCAACTTGTTTGTGAAAGGTTCTTTTGTGAAGAAACCTCCTTCTGGCAGTTCTGGACAAGAAGACACCAGCAATGGAAATGTTCAGGAGATGTCAGCTCGTGAGAAATTATTAAGCGATCAGCCTGAGTTACTTCAGCAATTTGGGATGGATCTCCTCCCAGTTTTAATTCAGATATATGGTGCTAGCGTCAATGGTCCAGTTCGCCATAAATGTCTTTCTGTCATTGGAAAATTGATGTATTTCAGCACTGCTGATATGATCCAGTCTTTGTTGAGTGTAACAAATATATCAAGTTTCTTAGCTGGTGTGTTAGCCTGGAAAGATCCGCATGTTTTGGTACCTGCCTTGCAAATTTCAGAAATTCTTATGGAAAAGCTTCCTGAAACTTTTGCTAAGATGTTTGTCAGAGAAGGTGTGGTCCATGCGGTTGACCAACTTATTTTGGCTGGAAATTCAACCAATATACCTACACAAACATCATCTGCTGAGAAGGATAGTGATTCTGTATCTGGAACTTCTTCTCGCCCCAGACGCTATCGCCTGCGCAGTGGTAATTCAAATCCTGATGCAAACCCTTTGGATGATTTGAAAAGTCCAGTTCCAGTAAATGTTGGTTTACCACCAAGTTCTGTAGAAACTCCAACAAATAGTTCCAGTGTCCGAGTGTCTATTAGCTCAGTTGCTAGAGGTTTTAAAGACAAGTACTTCCCTTCTGATCCTGGGTCTATTGAAGTGGGTGTTAGTGATGATCTTTTGCATTTGAAAAATCTCTGTGCCAAGTTGAACAGTTGTGTTGATGATCAAAAAACTAAGGCAAAGGGAAAAGTTAAAGCTTCTGGTTTTGGTCTGGACGATAATTCTACTAACATAGAAGAATATTTGATTGGGGTGATATCTGACATGTTAAAGGAACTTGGCAAAGGTGACGGTGTATCTACTTTTGAATTTATTGGTAGTGGTGTTGTTGAAGCCTTGCTGAATTACTTATCTTGTGGGTATTTCGCAAAAGATAGAATGTCAGAAACCAGTCTCCCCAAGCTTCGTCAACAGGCACTAGCTAGGTTCAAGTCATTTGTAGCTATTGCACTACCTTTGAGCATTGATAATGCAGCTGTTGCTCCTATGACTGTCTTGGTTCAGAAGCTTCAAAATGCCTTGTCCTCCTTGGAGCGCTTCCCTGTAATGCTGAGTAATTCATCTCGTTCATCTAGTGGGAGTGCACGTCTTTCCTCTGGGCTAAGTGCATTATCTCATCCCATAAAGCTTCGTCTCTGTCGAGCCCAGGGTGAAAAGTCACTTAGGGATTATTCTTCCAATGTGGTACTGATTGATCCATTAGCAAGTTTAGCAGCCATTGAGGAATTTCTGTGGACTCGTGTCCAGCGTGGTGAATCTGGTCAAAAGTCTACCGTAGCTGCTGACAATTCTGAATCTGGAACAACTGCTGCAGGGGCAGGTGTTTCATCTCCTTTCTCTTATACTCCCTCCACTGCCCGTCGGCATTCAACTAGATCCAGATCATCTGTTAATATAGGAGATACACCTAGAAAAGAACTATCTCAAGATAAAAGCACAAGTTCATCCAAGAGCAAGGGTAAAGCTGTATTAAAGACTGCACAGGAGGAAGCAAGAGGACCTCAAACACGAAATGCTGTTCACAGAAGAGCGGTTCTAGATAAAGATGCTCAAATGAAACCTGTAAATGGTGAATCAACTTCTGAG 3189 0.4494 METRSRKRAEASSAAPSSSSTTRSAKRSRLSSSIPNTPSVNTRSRSVRTNTTTTNNNSVSLMDPTIESSGSRRDRRGKNLERDNSDKGKEKEQDVRIRDVERERALALNMESEGVGDDDDNDSEGGLHQNLTSASSALQGLLRRLGAGLDDLLPATAMGGSASSSYQSGRLKKILAGLRADGEEARQLEALSQLCDMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDVMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTTCLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPPDAADFVMEAVPLLTNLLQYHDSKVLEHASICLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNNSVSPALSRPADQIFEIVNLANELLPPLPHGTISLSVSSNLFVKGSFVKKPPSGSSGQEDTSNGNVQEMSAREKLLSDQPELLQQFGMDLLPVLIQIYGASVNGPVRHKCLSVIGKLMYFSTADMIQSLLSVTNISSFLAGVLAWKDPHVLVPALQISEILMEKLPETFAKMFVREGVVHAVDQLILAGNSTNIPTQTSSAEKDSDSVSGTSSRPRRYRLRSGNSNPDANPLDDLKSPVPVNVGLPPSSVETPTNSSSVRVSISSVARGFKDKYFPSDPGSIEVGVSDDLLHLKNLCAKLNSCVDDQKTKAKGKVKASGFGLDDNSTNIEEYLIGVISDMLKELGKGDGVSTFEFIGSGVVEALLNYLSCGYFAKDRMSETSLPKLRQQALARFKSFVAIALPLSIDNAAVAPMTVLVQKLQNALSSLERFPVMLSNSSRSSSGSARLSSGLSALSHPIKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAIEEFLWTRVQRGESGQKSTVAADNSESGTTAAGAGVSSPFSYTPSTARRHSTRSRSSVNIGDTPRKELSQDKSTSSSKSKGKAVLKTAQEEARGPQTRNAVHRRAVLDKDAQMKPVNGESTSE 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00045 1063 MobiDBLite consensus disorder prediction 68 108 - -
Spst9g00045 1063 SUPERFAMILY ARM repeat 170 639 IPR016024 -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 643 708 - -
Spst9g00045 1063 Gene3D - 172 646 IPR011989 -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 643 681 - -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 955 1004 - -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 955 1063 - -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 1036 1050 - -
Spst9g00045 1063 SMART arm_5 202 243 IPR000225 GO:0005515
Spst9g00045 1063 SMART arm_5 285 325 IPR000225 GO:0005515
Spst9g00045 1063 SMART arm_5 328 366 IPR000225 GO:0005515
Spst9g00045 1063 MobiDBLite consensus disorder prediction 1 129 - -
Spst9g00045 1063 FunFam HECT ubiquitin protein ligase family protein KAK 164 478 - -
Spst9g00045 1063 MobiDBLite consensus disorder prediction 10 67 - -
Spst9g00045 1063 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 10 1063 IPR045322 GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00045 Spst-Chr9 374816 379029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00045 K10590 - gmx:100791450 1701.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00045 9 374816 379029 Spst9g00045 9 374816 379029 ECH