Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00039 ATGATAGTGGTCTTTGAGAAGAGTGATAATGATGATGGAGGCAATGTAATGGGATGGAATAGTGATATAGGTCTGGTTTTCACATGGAATACACCCTACCCTTTGCTTGCGGTTGCGCAAGAGCCGCCCAAGAGACTGGCGAAGATTGTTAACCAAGATACACAAGTCAACAAAAATGCTTTCGACAACAAGTACAATCACAACGCTCAACCTTTACCCTCGTATTCTCTAAACTTGGTTGCTCAACTTGATGAACAGAGAGAGATTGATCACTGTATCAGATCTCAGAATGAAAACTTGAGAATTTTGCTGCAAGAGCAGAGGAAAAAGCACATGGCGGAGTTAGTGAAGAAGATGGAATTGAATGCTCTTCAATTGTTGAGACAGAAAGACGAAGAAATAGTGCAAGCAACGCAGAAAACAACGGAGTTGAAAGAATTTTTGAGAAGGTTGGAAATAGAGAAGGAATCGTGGCGAAAGGTGGCTGAGGAAAACGAGGCAATGGTATTGTGTCTTCATAACAACATAGAACAGATGAAGGAAAGAGCAGTGTATGGGATGACATCAGAGGATGCAGAGTCGTGTTGCGATGATAACATGAGAATCACGGCAATGGGGGAAGGTACAGGAGAAAAGAGAGTGTGGCGTGGTGGGGTAGGAGAAGTCGAACAAATTGGGAAAATGACAATGGATTGCAAATGTTGTAATTCTCAAAAATCGTGTTTTATGTTTCTTCCTTGCAGGCATCTCTGTTCGTGTAAAACTTGTGAGCCTTTTCTGCAAGTTTGTCCTGTCTGTAGTACGCCCAAAAAGTCTAGCATAGAGACTTTAATTGTATGA 840 0.4179 MIVVFEKSDNDDGGNVMGWNSDIGLVFTWNTPYPLLAVAQEPPKRLAKIVNQDTQVNKNAFDNKYNHNAQPLPSYSLNLVAQLDEQREIDHCIRSQNENLRILLQEQRKKHMAELVKKMELNALQLLRQKDEEIVQATQKTTELKEFLRRLEIEKESWRKVAEENEAMVLCLHNNIEQMKERAVYGMTSEDAESCCDDNMRITAMGEGTGEKRVWRGGVGEVEQIGKMTMDCKCCNSQKSCFMFLPCRHLCSCKTCEPFLQVCPVCSTPKKSSIETLIV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00039 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 278 IPR013083 -
Spst9g00039 279 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 55 275 IPR017066 -
Spst9g00039 279 Coils Coil 148 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00039 Spst-Chr9 328509 334405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00039 232 268 Miscellaneous Gene Families AT4G39050 43.243 8.50e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00039 K19042 - gmx:100776899 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00039 9 328509 334405 Spst9g00039 9 328509 334405 ECH