Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00023 ATGGAGGCTTGGGGGAGACACAGGATAATGTTGACAAAAGAGGAGGAAGAAGAGAAGAAGAAGGGAAGGGAAGGTGCGAAATCCAAAAACCCTACTGCTGGAAGTGGAAGTGGAAGTGGAAGCGAAGGGAGGGAGAATCGAAGGAGGAAAGGGATGACGATCCATTCGATAGTGATACAGAAGCTGCTGAGCACGAATGCCCAGGTGGGTCGACGAGTTGCGACTCACCATTTCAAGGAGTACACCTATGGCTTCCGCAACAAGATGGCCATTATCGACTCCGACAAAACCCTCATTTGCATGCGCAGCGCCTGCAACTTCATCGCCGCCCTCGCCCGCCACAATGCCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGACATCTTCGACCTCATGACTAAAAAGGTTGGCTCCTACAGCTCCTCCACCCACTCCCTCTGGCGCAGCGGCGGCTTCCTCACCAACAGCTACAGCCCAAAGAAGTTCCGCTCCCGCAACAAGAAGCTCGTCTTTGGCCCCACCCAGCCTCCCGATTGCATCGTCGTTGTCGACACTGACCGAAAGTCTAACGTTATTAGCGAGGCTTTTAAGCTTCAAATTCCCGTTGTCGCATTGGTCGACTCCGCCATGCCCCTTGATATCTATAAGCGCATTGCTTATCCTGTTCCCGCCAACAATTCTGTTCAGTTCGTTTATTTGTTCTGTAATTTGATCACCAAAACGCTGCTTCATGAGAAGAACAATCTCAAAATTGATTCTCGAGAAGAAGCACCGCGCAAGGGCAAGAGCGATTTGGATAAGTTTGGCTTAACCGTAGTTCCCTATGCTAGTTTAGCTCCCTTACCCGAAGGCGTTTTCACATCCAAAGCAGATATAGAGGAAACCAAAAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTCAGTGGTGCCAAGGGAAGAAATATGGATTTTGAGGATCCCAAATCTGCAATTAATATTAGTGATGGACTAACATTTCTGGATTTGATCATTAACCAGCTTGAGACTCTCAACTCTAAGTATGGATGCAGGGTTCCATTGCTTCTTTTCAACAAAAACGACATTCATGATAGTTCTCAAAAGGTTTTGGAGAAGTATTCAAAATCAAGTGTTGAAGTACACACATTGAAACAGGGTGAAGGTGGAGAATTGAAATCATCGGGTGGACATTCCAGTAAGGAGGAAGTGCATCCATTTGATGATGTTGATGTGTTCCATACACTCATGACTGGTGGAACCCTTGATTCATTATTGTCACAGGGTAAAGAGTATATCCTAGTGTTGAAATCAGAAAATGTGGCAACAGTTGTTGATCCAAACATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACACCAAGCCATTCGTTTAACTTAATCTTAACTGCTATGAAATTTAAGCTTCGAGAGATTGCTCAAAACCAAGATAAACATTTGAAGGACAATTTCAAACTCATTGATACAAGAAACATGTGGGTGAGTTTAAGAGCCATCAAGAGGTTTGTTGATACTGACAAACTAAAGCAGAAGAAGCCCACAGTTTTGAAGGATACAGCAACTGGATCAACTATACAGTTCTTTGATAATGTAATTGGTGTCTCTGTGCCTGAATCTCGCTTTCTTCCATTGGATGCAACATCAGATCTGTTACTTCTTCAGTCAGATCTATACACATGTAGAGAAGGTGTTTTAACTCGCAATCCAGCTAGAACTAACCCTTTAAATCCTGTGATAGACTTGGGGCCGGAATTTGAAAAGGTTGGTGACTTCCAAAGTCGTTTCAAATCCATTCCAAGCATCATTGAGCTAGATAGTTTGGTGGTGAGAGGTGATGTGTGGTTTGGAGCTAATATTACTTTGAAGGGACAAGTGACTATTGCTGCAAAACCTGGCTTGACATTGGAAATTCCAGATGGGGTGACGATCGAGAATAAGGAGCTCAACGACCCTGCAGGTATCTGA 2001 0.4408 MEAWGRHRIMLTKEEEEEKKKGREGAKSKNPTAGSGSGSGSEGRENRRRKGMTIHSIVIQKLLSTNAQVGRRVATHHFKEYTYGFRNKMAIIDSDKTLICMRSACNFIAALARHNARFMFINTNPLFDDIFDLMTKKVGSYSSSTHSLWRSGGFLTNSYSPKKFRSRNKKLVFGPTQPPDCIVVVDTDRKSNVISEAFKLQIPVVALVDSAMPLDIYKRIAYPVPANNSVQFVYLFCNLITKTLLHEKNNLKIDSREEAPRKGKSDLDKFGLTVVPYASLAPLPEGVFTSKADIEETKKLLDKLVVLKFSGAKGRNMDFEDPKSAINISDGLTFLDLIINQLETLNSKYGCRVPLLLFNKNDIHDSSQKVLEKYSKSSVEVHTLKQGEGGELKSSGGHSSKEEVHPFDDVDVFHTLMTGGTLDSLLSQGKEYILVLKSENVATVVDPNILNHLMINDIEYCMEVTPSHSFNLILTAMKFKLREIAQNQDKHLKDNFKLIDTRNMWVSLRAIKRFVDTDKLKQKKPTVLKDTATGSTIQFFDNVIGVSVPESRFLPLDATSDLLLLQSDLYTCREGVLTRNPARTNPLNPVIDLGPEFEKVGDFQSRFKSIPSIIELDSLVVRGDVWFGANITLKGQVTIAAKPGLTLEIPDGVTIENKELNDPAGI 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00023 666 PANTHER - 100 664 IPR016267 GO:0003983|GO:0006011
Spst9g00023 666 FunFam UTP--glucose-1-phosphate uridylyltransferase 557 665 - -
Spst9g00023 666 MobiDBLite consensus disorder prediction 1 27 - -
Spst9g00023 666 SUPERFAMILY Ribosomal protein S2 59 252 IPR023591 -
Spst9g00023 666 MobiDBLite consensus disorder prediction 1 50 - -
Spst9g00023 666 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 246 556 IPR029044 -
Spst9g00023 666 Gene3D Hexapeptide repeat proteins 557 666 - -
Spst9g00023 666 Gene3D - 52 245 - -
Spst9g00023 666 PRINTS Ribosomal protein S2 signature 179 196 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 PRINTS Ribosomal protein S2 signature 59 77 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 PRINTS Ribosomal protein S2 signature 196 207 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 PRINTS Ribosomal protein S2 signature 220 234 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 Pfam Ribosomal protein S2 176 244 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 Pfam Ribosomal protein S2 62 159 IPR001865 GO:0003735|GO:0005840|GO:0006412
Spst9g00023 666 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 640 IPR029044 -
Spst9g00023 666 Pfam UTP--glucose-1-phosphate uridylyltransferase 236 634 IPR002618 GO:0070569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst9g00023 Spst-Chr9 224672 234209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00023 K00963 - gmx:100812583 1004.97