Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst9g00009 ATGGAGAACAGGGTAATATTACAGGAATGGTTTGACCGCGTTGACTCGGAGAAAAGTGGAAGCATAACAGCGGTGCAGCTGAAGGCAAAAAAGTCTCTAGCTGTGGGCAACCTGCAATTCCCCCTCTCAGTGGTTCACCAAATGATCAAGATGTACGATTTCGACAGAAATGGTACCATGAGCTTTCAAGAATTCGTTGCTCTCAACAACTTCCTTCTAAAGGTCCAACATGCTTTTTCGGATCTAGAGAGGGGTCGTGGTTTTCTTGTCCCAGATGATGTATTTGAGGCTTTGTTAAAAATCGGTTTCAAGCTGGATTCTCCTGCTTTTTATTCTGTCTGTGAGACATTCGATCAAAGTAAAAATGGAAGGTTTCGGCTGGACGACTTCATATCCATTTGTATATTCTTACAATCCGCACGGAATCTGTTTAATTCTTTCGATACAGCGAAACAAGGCAGGGTTACTCTCGATCTGAATCAATTTGTCTATTGTACTGCCAATTGCAGAATATGA 516 0.4205 MENRVILQEWFDRVDSEKSGSITAVQLKAKKSLAVGNLQFPLSVVHQMIKMYDFDRNGTMSFQEFVALNNFLLKVQHAFSDLERGRGFLVPDDVFEALLKIGFKLDSPAFYSVCETFDQSKNGRFRLDDFISICIFLQSARNLFNSFDTAKQGRVTLDLNQFVYCTANCRI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst9g00009 171 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
Spst9g00009 171 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Spst9g00009 171 Gene3D - 1 169 - -
Spst9g00009 171 PANTHER PEFLIN 6 169 - -
Spst9g00009 171 SUPERFAMILY EF-hand 6 167 IPR011992 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst9g00009 7 133 EF-hand Containing Proteins AT3G10660 27.612 1.72e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst9g00009 - - gmx:100792880 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00009 9 115984 119698 Spst9g00009 9 115984 119698 ECH