Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02393 ATGGATTTCAGAGTGATGGGTTTAGAGTCTCCCTTGTTCCACACGCTGCACCGCATGATGGACATGTCGGAGGATGGTGCAGGGGACAAGACACACAATGCTCCGACACGGTCATACGTGCGAGACGCGAATGCCATGGCTGCAACACCTGCGGATGTGAAGGAATATCCTAATTCCTATGTGTTCGAGATCGATATGCCAGGTTTGAAATCAGGTGACATAAAGGTTCAGATAGAAGATGACAACGTTCTTGTGATTAGTGGGGAGAGGAAGAGGGAAGAAGAGAAAGAAGGAGGAAAATATCTCAGAATGGAAAGAAGGGTTGGTAAATTCATGCGCAAATTTGTGTTACCAGAAAATACAAACACTGATGCAATTTCTGCGGTGTGTCAAGATGGGGTTCTTAGTGTTACCGTGCATAAATTGCCTCCTCCTGAACCTAAGAAGCCGAAGACTATTCAGGTCAAG 468 0.4594 MDFRVMGLESPLFHTLHRMMDMSEDGAGDKTHNAPTRSYVRDANAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQIEDDNVLVISGERKREEEKEGGKYLRMERRVGKFMRKFVLPENTNTDAISAVCQDGVLSVTVHKLPPPEPKKPKTIQVK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02393 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 156 IPR031107 -
Spst8g02393 156 Gene3D - 5 156 IPR008978 -
Spst8g02393 156 SUPERFAMILY HSP20-like chaperones 32 150 IPR008978 -
Spst8g02393 156 FunFam 17.3 kDa class II heat shock protein-like 11 156 - -
Spst8g02393 156 Pfam Hsp20/alpha crystallin family 52 156 IPR002068 -
Spst8g02393 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 156 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02393 Spst-Chr8 35421465 35421932 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02393 K13993 - gmx:100813195 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02393 8 35421465 35421932 Spst8g02393 8 35421465 35421932 ECH