Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02355 ATGGAGCCTCCCGCATCCTACATTTCGTCCTCCGAGCTGAGCAACCACAACACGCCGCACGACGCGTGGATCTCAATCCACGGCAAAATCTACGATGTCTCCTCCTGGCTCCAACGCCACCCCGGCGGCGCTCTCCCCCTCCTCACCGTCGCCGGCACCGACGCTACCGATGCCTTTCTCGCCTTCCACCCCGCTTCTGCTGCCCTCCTCCTGCCGGCCTTCTCCACCGGCCTCAGCCTCTCCGACTACGCCGTCTCCGCTGCCTCCTCCGACTACCGCAAGCTATTCTCCCACCTCTCCGCACTCAACCTCTTCGAACGCAAAGGCCACACCACCCTCATCTTGCTCTCCCTCATCCTCACCCTCCTCCCTCTCTGCGTCTGCGGCGTCGTCTGCTCGGAGAGCACGTGCGTGCACATGCTCTCCGGCGCCTTGATCGGCTTCCTCTGGATTCAGAGCGGCTGGATTGGTCACGACTCCGGTCACTACAACGTCATGCTCACCCGCCGCTTCAACCGCTTCGCCCAGATCCTCTCCGGCAACGTGCTCGCCGGGATCAGCATCGCCTGGTGGAAGTGGAACCACAACGCGCACCACATTGCTTGCAACAGCCTCGACTTCGACCCTGATCTTCAGCACCTGCCTTTCTTCGTCGTCTCATCTAAATTTTTTAACTCCCTCACTTCCAAATTCTACAATAGAAAACTCAATTTCGATTCCCTCGCTAGGTTTTTGGTTAGTTACCAGCATTGGTCTTTCTACCCTGTCATGTGCTTCGCAAGGGTTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTGTCCAAGAGAAAGGTGGAGAACAGAGGAGTTGAGCTTTTAGGGTTACTTGCATTTTGGGTTTGGTACCCTTTGTTAGTCTCCTTCTTGCCAAATTGGTGGGAGAGGGTTTTGTTCGTTGTGGTTAGCTTTTCTGTGACAGGTATTCAGCACGTGCAGTTTTGCTTGAACCATTTCTCTTCCAAAGTTTACCTTGGTCCTCCAAGTGGTGATGATTGGGTTGAGAAGCAGACTAATGGGACTCTTGATGTGAACTGTTCTGCTTGGATGGATTGGTTTCATGGTGGCCTGCAGTTTCAGGTGGAGCATCATTTGTTTCCCCGGCTGCCACGCTGCCATTTGAGAAAGATCGCGCCGTTGGTTAAGGATCTTTGCAAGAAGCATAACCTTCCTTACAATTGTGTCTCGTTTTGGAAGGCCAATGTGCTGACAATTCAGACACTGCGAAATGCAGCGTTGCAGGCAAGGGATGGTTCTGGGCCAGCTCCCAAGAATTTGGTTTGGGAGGCTGTTAATACCCATGGATGA 1344 0.5357 MEPPASYISSSELSNHNTPHDAWISIHGKIYDVSSWLQRHPGGALPLLTVAGTDATDAFLAFHPASAALLLPAFSTGLSLSDYAVSAASSDYRKLFSHLSALNLFERKGHTTLILLSLILTLLPLCVCGVVCSESTCVHMLSGALIGFLWIQSGWIGHDSGHYNVMLTRRFNRFAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSKFFNSLTSKFYNRKLNFDSLARFLVSYQHWSFYPVMCFARVNLFAQSFFLLLSKRKVENRGVELLGLLAFWVWYPLLVSFLPNWWERVLFVVVSFSVTGIQHVQFCLNHFSSKVYLGPPSGDDWVEKQTNGTLDVNCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSGPAPKNLVWEAVNTHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02355 447 PANTHER FATTY ACID DESATURASE 2 5 428 IPR012171 GO:0016491
Spst8g02355 447 CDD Delta6-FADS-like 140 402 - -
Spst8g02355 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 67 IPR001199 -
Spst8g02355 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 89 IPR001199 -
Spst8g02355 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 73 IPR036400 -
Spst8g02355 447 PIRSF FA_sphingolip_des 2 435 IPR012171 GO:0016491
Spst8g02355 447 Gene3D - 2 78 IPR036400 -
Spst8g02355 447 SMART Cyt_b5_2 8 80 IPR001199 -
Spst8g02355 447 Pfam Fatty acid desaturase 139 406 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02355 Spst-Chr8 34678045 34679388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02355 2 447 Lipid Metabolism Gene Families AT2G46210 60.987 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02355 K21737 - gmx:100776476 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02355 8 34678045 34679388 Spst8g02355 8 34678045 34679388 ECH