Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02331 ATGGATTTTATCAACCGAGTGTCCGAGTTTAGCAAGACATCTCCCATTCTCCACCACCGCCGTAGCTATCCCCGTCAACCGTCTGCGTCGATGTCGTCTTCTTACGAGCACGACGCCGAGCCTCTCCGGCGCAACCGCATCCTCTCCAGCAAGCTCTACTTCGACGTGTCTCCGTCCAAGGTTCCGCTAATCTACTCCGAGTCCTATGACATAGCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAAATTGCATCGTTGAGCCTCTGGAAGCTTCCAAGGACGATCTTCTAGTGGTTCACTCAGAATCGTATCTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTTTCCATTCAGGAAGCAGGTTGGAGGAACTATATTGGCTGCAAAACTTGCTAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGCTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGTCATGAAATGGACTTTGCCTATGATAGCCGAGTCTATATCCTGGATATGTACAACCCTGGAATATATCCTTTGGTAATCTCCTTTATTTTGTCCTGCTATATTTCACTGAACATTATCTCCACTCTTAGGGATAACTTTGCAAATAATGACCCCTTCTAG 852 0.4542 MDFINRVSEFSKTSPILHHRRSYPRQPSASMSSSYEHDAEPLRRNRILSSKLYFDVSPSKVPLIYSESYDIAFLGIEKLHPFDSSKWGRICRFLVSFGILDKNCIVEPLEASKDDLLVVHSESYLNSLKESSKVAMIVEVPPVALIPNCLVQQKVLFPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLVISFILSCYISLNIISTLRDNFANNDPF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02331 283 Pfam Histone deacetylase domain 80 254 IPR023801 -
Spst8g02331 283 SUPERFAMILY Arginase/deacetylase 58 255 IPR023696 -
Spst8g02331 283 CDD HDAC_classIV 80 255 IPR044150 GO:0004407|GO:0016575
Spst8g02331 283 PANTHER HISTONE DEACETYLASE 2-RELATED 50 254 - -
Spst8g02331 283 PRINTS Histone deacetylase superfamily signature 218 233 IPR000286 -
Spst8g02331 283 PRINTS Histone deacetylase superfamily signature 184 207 IPR000286 -
Spst8g02331 283 Gene3D Histone deacetylase domain 60 260 IPR037138 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02331 K11418 - gmx:100781276 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02331 8 34372626 34375082 Spst8g02331 8 34372626 34375082 ECH