Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02217 ATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGGAAATCGTAGTAAACAAAAACCATTTGGCCTTTTGCTACCCATCTTACTTCGTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACGTTATTTGCTAAATTGAAGAAAGGTGAAATACCGAAAGACAGCTTTGTGCGGCTTTTGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTAGCAGAAGTACAAATGCGGCAACCACAGGCAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCTCCCTCTAAGGATGTCAACTGTTAGTTCAGGTGCAAGGCAATTGAATGATCCCCATGCTTTAGCACAGATGCACCAAAGAAGTATGAATGTTGCTGTTGACCAATCTCGCATGAGTTCTTCAGCTGGTCAAACTACAGAGAGCAATGCTAGAAAGCCTCAGGAATTCGATGTTAAAATAGAATCTCAAGGATTGCAATCAAATCAGTTGACATCTTCCAGTTCCAACACAGTTGGTCAAGAAGCAGAAAGAACATCAGTTCATATACAAGGGCTTAATAAACAGCAGCAACACCATCTACATTTTGCATCAGCATATGGAAACAGTGGTGGTAACTATAACCCTTTTTCTGGGACAACAAGTAGTTCCACATCATCTATCAAACAGCAAACGCATGAATCACATAATCAAATTCCTCATCAAAACATTGGTTCAAATCATTTAGGTGGTTCAGCACATGGTTTGAGTGTAATTTGTGTGCCAAAACTTGAACAGCAGAATTCTTTCAATGATCCCAAAAGACTGCCAGGTGGATCTGTTTCTCCTGCTGTAAACGATACAGCATCTCAGCAAACGTCGAATGCTTGGCAACCATCTACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTACTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCTACTCAAGGAACTCTAAAAGATGAATTTTCGAGAGGTCTTCCAGCATCCACAAGCATGCCACCTACAACATCTACTGGCTTGCTAGCACATGGTTCTGCTTCCTCTTCTGTAATCACCCACCTAGACTCCAGTGTCTCGCCCACTTCTGAAATTGATCAGCTAAGCTCTCAGATTCAATCAAATGCTTCTGGAATTGTTGCAAGGACACCTCTTAAAAAGTCTGCTGTTACCCAAAAGAATCCACTTGAAGCACTTGGTTCCTCACCTCCTCCTCCTAGGAAGAGGAAGAACAGTTTATTTTCAGAGCCCAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAATTAA 1449 0.421 MSNQQATVSEQPSSQGNRSKQKPFGLLLPILLRQLAKDRAMQLQTLFAKLKKGEIPKDSFVRLLKGIVGDQMLRLALAEVQMRQPQARPNQASAGQQLPLRMSTVSSGARQLNDPHALAQMHQRSMNVAVDQSRMSSSAGQTTESNARKPQEFDVKIESQGLQSNQLTSSSSNTVGQEAERTSVHIQGLNKQQQHHLHFASAYGNSGGNYNPFSGTTSSSTSSIKQQTHESHNQIPHQNIGSNHLGGSAHGLSVICVPKLEQQNSFNDPKRLPGGSVSPAVNDTASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPTDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGATQGTLKDEFSRGLPASTSMPPTTSTGLLAHGSASSSVITHLDSSVSPTSEIDQLSSQIQSNASGIVARTPLKKSAVTQKNPLEALGSSPPPPRKRKNSLFSEPKEDSRVSEASRKAVQEEEERLILQKAPLQKN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02217 482 MobiDBLite consensus disorder prediction 157 180 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 363 379 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 418 482 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 1 21 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 445 476 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 279 302 - -
Spst8g02217 482 Pfam RCD1-SRO-TAF4 (RST) plant domain 18 81 IPR022003 -
Spst8g02217 482 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 447 481 IPR045144 GO:0005669|GO:0006352
Spst8g02217 482 MobiDBLite consensus disorder prediction 265 302 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 341 379 - -
Spst8g02217 482 ProSiteProfiles RST domain profile. 15 86 IPR022003 -
Spst8g02217 482 MobiDBLite consensus disorder prediction 418 432 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 127 148 - -
Spst8g02217 482 MobiDBLite consensus disorder prediction 127 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02217 Spst-Chr8 32040759 32044950 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02217 K03129 - gmx:100795389 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02217 8 32040759 32044950 Spst8g02217 8 32040759 32044950 ECH