Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02150 ATGTCATATCATTTTGTCTATGAAACCAAAATGCCAGTGAGTATAACAGAGAAAGATATCATCTCGTTATGTATACAAGGAGAGACAAATGGCTCAAAGAATAAAATAATGAAAGCATTGGAAAATGCAGACAGAAATGAAAATGGCTGTTTCAGCAAGGATGAACTCATGCATGCTCTCAAAGACTTAGGTGTCATCTTTCCTCGTTGGAGAGCCTTCCGGGCATTCAGAAAAGCTGATACCAACCATGACGGTCAAATTAGCGGCGAGGAAATCAAGTCTCTCCTTCAGTATCTTCGTTCTTGTGGGTTTGGGAAATAG 321 0.3988 MSYHFVYETKMPVSITEKDIISLCIQGETNGSKNKIMKALENADRNENGCFSKDELMHALKDLGVIFPRWRAFRAFRKADTNHDGQISGEEIKSLLQYLRSCGFGK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02150 106 Pfam EF hand 74 95 IPR002048 GO:0005509
Spst8g02150 106 ProSiteProfiles EF-hand calcium-binding domain profile. 31 66 IPR002048 GO:0005509
Spst8g02150 106 Gene3D - 14 102 - -
Spst8g02150 106 SMART efh_1 35 63 IPR002048 GO:0005509
Spst8g02150 106 SMART efh_1 71 99 IPR002048 GO:0005509
Spst8g02150 106 ProSitePatterns EF-hand calcium-binding domain. 80 92 IPR018247 -
Spst8g02150 106 CDD EFh 35 97 IPR002048 GO:0005509
Spst8g02150 106 SUPERFAMILY EF-hand 30 98 IPR011992 -
Spst8g02150 106 ProSiteProfiles EF-hand calcium-binding domain profile. 74 102 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02150 Spst-Chr8 30514997 30515317 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02150 - K02183 vra:106764438 121.709