Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g02113 ATGGAAGAAGCAGCTGGTGCAGGTTCCAACAAAGCTAGCAAGGACCACGTGACAACGAATCCTCAAGGTGCAACAATAAGGCGAGGAGCTAAGTCACATTGTAGATTTGAACGAACTTGGACAGGTCCATTAGAAGGTCAAGTTGACAAGTCCATTGCTTCTATGTACAAGAAACTGCAAAAGAATTTGACCTCAGAGGAACTGTTACCCTCCTTATGGGACAAATGCAAGAAGGAGTTTCTTGATAAGTACGAAAGTTTTGCCCAACTTGTGGCTAAGATTTACCCTACGGAGACTATCCCATCTGTTGCAGAGATGAGAGACCTTTTAGCTTCCATGTAG 342 0.4386 MEEAAGAGSNKASKDHVTTNPQGATIRRGAKSHCRFERTWTGPLEGQVDKSIASMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPTETIPSVAEMRDLLASM 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g02113 113 MobiDBLite consensus disorder prediction 12 26 - -
Spst8g02113 113 Pfam Exocyst complex component Sec3 47 96 IPR019160 GO:0000145|GO:0006887
Spst8g02113 113 MobiDBLite consensus disorder prediction 1 30 - -
Spst8g02113 113 PANTHER SEC3/SYNTAXIN-RELATED 47 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g02113 Spst-Chr8 29766609 29772315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g02113 18 113 EF-hand Containing Proteins AT1G47560 64.583 4.74e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g02113 K19983 - gmx:100784141 131.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g02113 8 29766609 29772315 Spst8g02113 8 29766609 29772315 ECH
Spst8g02113 8 29766609 29772315 Spst9g00412 9 3660044 3688879 PCT