Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01854 ATGAATACATCTCCATCCCAAACTGTTGTCATTTTTGCATGGTTGCTATGTGGAATCATGTTCAACACTGGCTTGTGCAGCTTCACTATTCGTTGCAAGCAACAAGACATGCATGCTCTCTTAAACTTCAAGCAAGGAGTCAAAGATCCATCTGGTCTTCTTTCTTCATGGTCAACTGAACTAGATTGTTGTGAATGGAGAGGAGTCAACTGTAACAACATCACAAGTAGAGTTACTGACCTCAGTCTCCCATGTTCTACAACTCTTCCATCTTACCTTGACAGAGAAGATAAATCACATTGCCTTACAGGTTCCATTCACCTATCCTTGTTGTTAATGGAGTTGGAATTTCTAGATTCCTTGAATTTGAGAAATAATGACTTCTTTGCCATACAATTTGATTATATGCATAATCATAATTGTCATAACCTATCTGCAACTACTCCTCATCACTGTGTTAACTCTTCAACTCTTCGTCATCTTGATTTATCATTGAATACAAAACTTGTCCTTAATAGCCTTCAATGGCTTCCCTCCATTTCCTCCTTGGAATATCTCAACCTTCGTTACATTGATCTTAGCAAGGAAACTAATTGGCTTCAATTGGTGACTATGCTTCCATCACTTTCATATCTTAATATGCGTTCTTGTCAGCTGGAAGACTTGAGTTTGTCTACTCAATATGCTAATTTCACTGCTCTCAAAGTTCTTCGTCTTTCCGCAAATGAATTTAACTCAGAATTACCTAAGTGGCTATTCAATCTTAGTTCCAATATCTATTCTTTAGACCTTAGTTCAAGTTCTTTGATAGGACATCTACCTAAGGCTTTGTTAAATCTTCGAGAGCTGGAAGACTTGGTCTTGGAAGACAATAACTTCGATGGACCCATTCCAGATTGGTTAGGTGAATTTGAACACCTGCAAGTTCTTATTATTGGAGTAAATATGTTTTCTGGATTTATCCCCACAAATTTGGGAAACATATCAACCTTAACTAACTTGGATGTGGCCTCAAATCCATTGACAGGAGTTGTGTCGGAGAGAAATCTAGCCAAATTGTCAAAATTAAAAGTTCTTTATATATACTCGTATTCAGCGTTAATCTTTGATTTTGACTCCCATTGGATTCCACCTTTTCAACTTGAAGAATTAGTTATCGGATTTGCAAACCCTAACCTTCCCACATGGTTATATACACAAAAATCTATTGAAAGTTTAACTATTTCTGGATCATCTTTTGAGGTCCAAGACAAATTTTGGAATTATGTATCGAGGATGAGTGAACTTGAATTAGAAGGTAATTCAATATATGGGAATATTTCAAATGTGTTGTTGAACTCTACATTCATTGATCTATCATCAAATGGTCTGAAGGGTTGTTTGCCTCGATTATCAGCAAATGTGGCTATTGCGGCGTTGTCAAATAATTCATTAACAGGAGACTTGTCTCCCCTCTTATGTGATCATAAGATGTTGAATGGGAAAAACAATTTGGTTTTCTTGGACATATCACAAAACCAATTATCTGGAGGGCTTACAAGTTGTTGGAAGAATTGGAAATCTTTGGTGGCTATTCACTTGGGAAGCAATAATCTGGAAGGAAAGATACCTCCATCCATGGGTTTGTTACCTAATCTTACCTCACTCCATCTGCATGAGAATAATCTACATGGAGAAATTCCTTCCTCATTGCAAAATTGTCGCTCTTTATTGGTCTTCAATGTTCGCAATAATCATTTTTCAGGGAACATTCCAAACTGGATATCACACAATGTAATGGCTCTCCAACTAAGTAACAATTTGTCTGGAACAATACCTCCCCAAATGTTTAGACTCACTGGATTGTCGTCCTTGAACTTGTCCCACAATAAATTAGCAGGGAAAATACCAAATGAGATCGGAAACATGAAAAACTTGGAGTCTCTTGATTTTTCAACAAACCAACTTGAGGGTGAAATTCCTGAGAGCTTATCCAGTTTGTCCTTTTTGGGTTCCTTAAACCTGTCATTCAACAATTTGACAGGCAAAATACCATCAGGCACACAACTTCAGGGGTTTACTGCACTGAGTTATATGGGAAATCGTGATCTTTGTGGACCTCCACTTACCGAATTGTGCTTTCAGGATGATAAACATAAAGACACAAAACTTGTAGATGAAGACGGACACCGATCTGAATTTTGGCCATGGTTTTACATTGGAATAGAATCTGGATTTGTGACGGGCTTTTTGGGAGTTTGTTGTGGCATTTTCTTAAGCAGAAGATTGAGGCACGCTTACTTCAAGATTGTTTCTGACTTGAGAGATCGACTTTATCTGATGATAGTCATCAACATAAATCCCTTCCGTAAAGATGCAGAGCAATACTGGCATTTCTCATTATTCAAAAGGACTAATTAA 2400 0.3738 MNTSPSQTVVIFAWLLCGIMFNTGLCSFTIRCKQQDMHALLNFKQGVKDPSGLLSSWSTELDCCEWRGVNCNNITSRVTDLSLPCSTTLPSYLDREDKSHCLTGSIHLSLLLMELEFLDSLNLRNNDFFAIQFDYMHNHNCHNLSATTPHHCVNSSTLRHLDLSLNTKLVLNSLQWLPSISSLEYLNLRYIDLSKETNWLQLVTMLPSLSYLNMRSCQLEDLSLSTQYANFTALKVLRLSANEFNSELPKWLFNLSSNIYSLDLSSSSLIGHLPKALLNLRELEDLVLEDNNFDGPIPDWLGEFEHLQVLIIGVNMFSGFIPTNLGNISTLTNLDVASNPLTGVVSERNLAKLSKLKVLYIYSYSALIFDFDSHWIPPFQLEELVIGFANPNLPTWLYTQKSIESLTISGSSFEVQDKFWNYVSRMSELELEGNSIYGNISNVLLNSTFIDLSSNGLKGCLPRLSANVAIAALSNNSLTGDLSPLLCDHKMLNGKNNLVFLDISQNQLSGGLTSCWKNWKSLVAIHLGSNNLEGKIPPSMGLLPNLTSLHLHENNLHGEIPSSLQNCRSLLVFNVRNNHFSGNIPNWISHNVMALQLSNNLSGTIPPQMFRLTGLSSLNLSHNKLAGKIPNEIGNMKNLESLDFSTNQLEGEIPESLSSLSFLGSLNLSFNNLTGKIPSGTQLQGFTALSYMGNRDLCGPPLTELCFQDDKHKDTKLVDEDGHRSEFWPWFYIGIESGFVTGFLGVCCGIFLSRRLRHAYFKIVSDLRDRLYLMIVININPFRKDAEQYWHFSLFKRTN 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01854 799 PRINTS Leucine-rich repeat signature 612 625 - -
Spst8g01854 799 PRINTS Leucine-rich repeat signature 498 511 - -
Spst8g01854 799 SUPERFAMILY L domain-like 427 703 - -
Spst8g01854 799 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 489 710 - -
Spst8g01854 799 Gene3D Ribonuclease Inhibitor 32 346 IPR032675 -
Spst8g01854 799 SMART LRR_typ_2 206 230 IPR003591 -
Spst8g01854 799 SMART LRR_typ_2 543 566 IPR003591 -
Spst8g01854 799 SMART LRR_typ_2 612 635 IPR003591 -
Spst8g01854 799 SMART LRR_typ_2 231 255 IPR003591 -
Spst8g01854 799 SMART LRR_typ_2 636 660 IPR003591 -
Spst8g01854 799 SUPERFAMILY L domain-like 32 363 - -
Spst8g01854 799 Pfam Leucine rich repeat 591 649 IPR001611 GO:0005515
Spst8g01854 799 Gene3D Ribonuclease Inhibitor 347 715 IPR032675 -
Spst8g01854 799 PANTHER UNNAMED PRODUCT 205 744 - -
Spst8g01854 799 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01854 Spst-Chr8 22591858 22595385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01854 450 707 Receptor kinase-like Gene Family AT5G46330 33.835 6.17e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01854 - - vun:114194260 996.497