Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01845 ATGGAAAACAGTTTGAAAAGAAAGTCTCGAGACAATGGAGACCATTTAATCTTCAACAGCTTTTCTCTGGATGACCTTAATGAAGATCTCTTAGAGAGGGTACTTTCATGGCTACCAACTTCCTCGTTCTTCCGCCTTACTTCAGTGTGCAAGAGATGGAAGTCAACAGCTGCATCTGTGAGTTTCAAGCTTGCCTGCTCACACATTCCTTCCCGGGATCCTTGGTTTCTGATGGTTTCTCCCACCCTCAACCAATCTATTGTCTTTGACACTGCTGAAAACAGTTGGAAAAAACTCAATCACTTGCGTCTTCCGCTCGAAGACTCTAACATAAACTGCATGCCTGTTGCATCTTCTGGTGGCCTGGTTTGCTACCGCAAACCTTCAGGAAACTTTGTTGTATGCAATCCAGTGACAGGATCCTGTAGTGAGCTCCCTCCATTGCATTCTCCCTCAGAAAATCAGCCTCTCAATGCCGTTGTGATGAGTACAACTTTCAAAGATCAAATCTCCTACAAGATTGTGTTAGTCTTCGGTGAACTCCCTAATCTTTTGTTTAAAGTCTATGACTCAGGCTCTGGCTGTTGGGAAGATGAGACTGCACTGAGGAGGGAGGTTGATGATAATTCCATTGATTGTGACTCAACTGATGATGACAATGTTGTGTATTTCCTTAGTAAGGCTGGAACAGTGGTGGCAAGTAGCATGCAGAGGAGCCCATCTAAGCAATATTCATCGGTTATTACCAACAAAGATGGTCAGGAGATGGTGTACTTTCTCAGCTCCTCAGGGACAGTAGTAGCTTGCAAATTGACATCCAAGTGCTTCTTTGAGTACCCCAGGTTGTTGCCTGTTTTCAGCGAGTACTCCATTGATATTGTGGAGTGTGGCGGTGAGATTCTGGTTGTTTTGTTATCAGAATTCTTGGAGAGCACAAGCCTTAGGGTGTGGAAATACGATGATGCAAATCGATGCTGGCAACAGATTGCTGCAATGCCTGCAGCAATGTCTCAAGAATGGTATGGAAAGAAGGCAGATATTAACTGTGTTGGAGCCGGGGATAGGATATTTATATGCTTGAACTCCCCTGAGCTATGCACTTACATTCTGTGTGATTTGGTGACCAACAAATGGACCGAGTTGCCTAAATGTTGCTTGAATGGAGAAGTCATGGAGTTCATGTCTGCCTTTTCATTTGAGCCAAGGATAGAGGCTTGTGTATGA 1224 0.442 MENSLKRKSRDNGDHLIFNSFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSTAASVSFKLACSHIPSRDPWFLMVSPTLNQSIVFDTAENSWKKLNHLRLPLEDSNINCMPVASSGGLVCYRKPSGNFVVCNPVTGSCSELPPLHSPSENQPLNAVVMSTTFKDQISYKIVLVFGELPNLLFKVYDSGSGCWEDETALRREVDDNSIDCDSTDDDNVVYFLSKAGTVVASSMQRSPSKQYSSVITNKDGQEMVYFLSSSGTVVACKLTSKCFFEYPRLLPVFSEYSIDIVECGGEILVVLLSEFLESTSLRVWKYDDANRCWQQIAAMPAAMSQEWYGKKADINCVGAGDRIFICLNSPELCTYILCDLVTNKWTELPKCCLNGEVMEFMSAFSFEPRIEACV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01845 407 Gene3D - 18 62 - -
Spst8g01845 407 SMART fbox_2 26 66 IPR001810 GO:0005515
Spst8g01845 407 Pfam F-box domain 23 62 IPR001810 GO:0005515
Spst8g01845 407 SUPERFAMILY Galactose oxidase, central domain 86 383 IPR011043 -
Spst8g01845 407 ProSiteProfiles F-box domain profile. 20 65 IPR001810 GO:0005515
Spst8g01845 407 CDD F-box_AtFBW1-like 24 62 - -
Spst8g01845 407 PANTHER BNACNNG10540D PROTEIN 22 406 - -
Spst8g01845 407 Gene3D - 78 402 IPR015915 GO:0005515
Spst8g01845 407 SUPERFAMILY F-box domain 18 103 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01845 Spst-Chr8 22485726 22486949 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01845 - - vun:114195471 749.969