Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01843 ATGGAGGAACAACACGACCAACAGCCTAAACCCAACAACATCAAAGCTTCCGACACCGACCCTTTTCTTTTAAACTACACACCTTCGGATCTCCGAACCGCTTCGGAATTTCTCGCCACCTGGCTCCCCTTTCTTTCCCGAGATCTCTGCACGCGCTGCACCCAATCTCTCTCCGATCGTATTCAATCCATCGCCCCAGGTGAAGCTCCCGCGCCCCAAAACGACAGTCCCATAGACCAAAACGACGCCGAAGATAACTGCGACGCTCATTCTCTGGGGAGTTGGAAAGACGGGGCGGAGGTGAATCCCAGTGTGGAGACTCCGACTCAGAGAGTTTGTTGGGCCGACATGGCCCAAGAAGATGATGAGCTTGGCGAAGAAGAAAACAACAACAATGGGGTAAATGTTGCTGCGGGTGATTCGAATTATGCTTCTGATTTGGGTAAGGTTGTGGCTGAGAAGCCTACTTTGCCTAGGGAGCAGAGGGAGTTCATTAGGTTCATGAGTGTGAGGCGCAAGAAGGACTTTATTTGCTTTGAGAGGGTTAATGGGAAGCTTGTAAACATTCTTGAAGGGCTTGAACTCCACACCGGGATTTTCAGTGCTGCTGAACAGAAAAGGATTGTTACTTATGTTGCTTCATTACAGGAGATGGGGAAAAGAGGAGAATTGAAAGAGCGGACATTCTCAGCTCCCCAGAAGTGGATGAGGGGCAAGGGACGCCAAACCATCCAATTTGGGTGCTGTTACAATTATGCAGTGGATAGAGATGGTAACCCACCTGGTATTCTTCCGCATTCAATGGTTGATCCTGTACCCGATCTTTTCAAGGTCATCATTCGGCGTCTGATCAAGTGGCACATACTCCCCCCTACTTGTGTGCCAGACAGTTGTATTGTTAATATCTACGAAGAGGGGGACTGTATACCCCCACACATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTCTCATTTCTTAGTGAGTGCAATATAGTTTTTGGATCAAACTTAAAGATTGTAGGCCCTGGTGAATTTGATGGTTCGATTGCTATTCCGTTACCTATGGGGTCTGTGCTTGTCTTGAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTGCCAGCAGTCCCTACGAGAAGGATATCGATCACATTTAGAAGAATGGATGTATCCAAGAGGCCTTTTGGGTATGTTCCAGAACCTGATCTTCAGGGGATCCAACCACTGGCCTATGAAGTTGATCAGGAAAAGAAATCAAGTGGACACAGACCTAATCGTCATGTGAAGAGAAATAGAGACAGGAGAGGAGGTGGCAGGAATGATGCAATGGGATTTGCAGCTAGAAATGATAGGTTCTCAGAGCACCGTGACTCGAATCTTAATTCACCCAGATCAGGAAATAGGTGGAGTAGAAAGCCTGTTAGTTGA 1434 0.4728 MEEQHDQQPKPNNIKASDTDPFLLNYTPSDLRTASEFLATWLPFLSRDLCTRCTQSLSDRIQSIAPGEAPAPQNDSPIDQNDAEDNCDAHSLGSWKDGAEVNPSVETPTQRVCWADMAQEDDELGEEENNNNGVNVAAGDSNYASDLGKVVAEKPTLPREQREFIRFMSVRRKKDFICFERVNGKLVNILEGLELHTGIFSAAEQKRIVTYVASLQEMGKRGELKERTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILPHSMVDPVPDLFKVIIRRLIKWHILPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGSNLKIVGPGEFDGSIAIPLPMGSVLVLNGNGADVAKHCVPAVPTRRISITFRRMDVSKRPFGYVPEPDLQGIQPLAYEVDQEKKSSGHRPNRHVKRNRDRRGGGRNDAMGFAARNDRFSEHRDSNLNSPRSGNRWSRKPVS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01843 477 Gene3D - 177 395 IPR037151 -
Spst8g01843 477 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 32 424 IPR044842 GO:0003729|GO:0006402|GO:0032451
Spst8g01843 477 MobiDBLite consensus disorder prediction 64 88 - -
Spst8g01843 477 MobiDBLite consensus disorder prediction 416 477 - -
Spst8g01843 477 Pfam 2OG-Fe(II) oxygenase superfamily 193 388 IPR027450 -
Spst8g01843 477 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g01843 477 SUPERFAMILY Clavaminate synthase-like 189 390 - -
Spst8g01843 477 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 294 391 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01843 Spst-Chr8 22474850 22478393 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01843 K10767 - gmx:100797674 818.15