Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01836 ATGAGCTTATCCAAGAAAGTATCCCAAACAGACGCAAAACTGAGCACCCCAAACAAAGCAACCTCTTTGAATCCAAATGCAGCAGAGTTTGTTCCCTTTGCCCTCAGATCATCGCCATCTGGCAGCACTAGCTCAGTAGATGCGACAGCGAGGTTTACTACTACTGCTGGATCTCTTGGTAAAGCAGTTCTCGATCGATCGGAATCATCCATTTCAAATAATTCCGATGATGAGGCTCACCGGTACTGGCGTTGTCAGCTTCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAAGATGAATCCCACGGTGTTAACAACCTCTCTTTGTCAGGCTTATCTATAAATGATGATAATGAATCCTCAATGATTCCTTCTTCTAAAGGAAGTAGATATATGTTAAATGAGCAGCAGGAATTGGCTCAACAGCACCTTAATGGCAATACTTTTGCTAATAAATTAAGGTTTTCGAATTCAATATACAGGGAGGAACCATCTTCACCAAGTATTTTGAACTCATCATCAGAACCTTGGGATAGGAAAATTGGGAGTACCGATTTGCATGTTAGCAATAGTCAAGAGGCACTTCTTTATGATAACAACTCTGGACACGGATTCTTAAATGATGTTTTTCCTGGAAATTCTCTTTTGAGTGATACTGATTTGAACCCTTTGGAGCTTTTAGCTTCTCTATTTCCCGGTTTTGCTTCAGAAAGCCTTGCTGAAGTTTTCTTTGCCAATGGATGCGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTCGATGGTAGTAGCTTCAATCAAAATCTGAGTCCAAAGACTGTGTCTGCTCCCAATCTGAGTGCAATGGAATTTCCGGCTCTTACTTCATCAAATGGCCAGAATACTGCAAAATATGCTGCAGAAAATGTTCAACAAGGTGGCAATCCTTACTTATCATCTGATAAAGACATGCTCATGTTCAAAACTGGCTCTTCTATTCCATCTAGAGGGGTTGTTGACTTTGCTGCAGCAGTCAGAAAATTGGCTTCTCAGGACTCTGGTATATGGAAGTACGATAAAAATGGTTCTGGTGATACTTCCACCAGCTCTAGTAGGAGTTTAAATGCTCTGGCTAGTGCCTACAGTGGTGGACAGGGGAGAGCTAATTTTGGTGATAGATTACAGAACCGCGGTTCTGCTCGGGCAGCTCCTGTTTGGCTTGAAACTGGTGACACAGTTGCAACTATGTACTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCTTATTTTGAGCAGGCACGACAAGCCTACCTTGTTGGCAACAAGGCCCTTGCAAAGGAGCTAAGTGTTAAAGGGCAACTGCACAACATGCATATGAAAGCCGCACATGGAAAAGCTCAAGAATCTATTTACCGTCAGAGGAATCCGGGGGCTCCAGAGATGCAAGTTAATGGAAGGGGGCACCAGAGAATGATAGACCTACACGGTCTGCATGTAAGTGAAGCGATCAACGTGCTGAAACACGAACTGAGTGTGCTTAGAAGCACTGCTAGAGCCTCCGAGCAGCGTCTACAGGTTTACATCTGTGTGGGCACTGGCCACCACACCCGTGGCTCACGCACTCCGGCAAGACTTCCAATAGCTGTACAGCAATATCTACTTGAGGAAGAAGGCCTTGATTTCAACGAACCGCAGCCGGGCCTGATTCGTGTTTAA 1728 0.4473 MSLSKKVSQTDAKLSTPNKATSLNPNAAEFVPFALRSSPSGSTSSVDATARFTTTAGSLGKAVLDRSESSISNNSDDEAHRYWRCQLPDDITPDFKVMGEDESHGVNNLSLSGLSINDDNESSMIPSSKGSRYMLNEQQELAQQHLNGNTFANKLRFSNSIYREEPSSPSILNSSSEPWDRKIGSTDLHVSNSQEALLYDNNSGHGFLNDVFPGNSLLSDTDLNPLELLASLFPGFASESLAEVFFANGCDLHLTIEMLTQLEIQVDGSSFNQNLSPKTVSAPNLSAMEFPALTSSNGQNTAKYAAENVQQGGNPYLSSDKDMLMFKTGSSIPSRGVVDFAAAVRKLASQDSGIWKYDKNGSGDTSTSSSRSLNALASAYSGGQGRANFGDRLQNRGSARAAPVWLETGDTVATMYSELREEARDHARLRNAYFEQARQAYLVGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPGAPEMQVNGRGHQRMIDLHGLHVSEAINVLKHELSVLRSTARASEQRLQVYICVGTGHHTRGSRTPARLPIAVQQYLLEEEGLDFNEPQPGLIRV 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01836 575 Gene3D - 463 575 IPR036063 -
Spst8g01836 575 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 575 - -
Spst8g01836 575 ProSiteProfiles Smr domain profile. 496 575 IPR002625 -
Spst8g01836 575 SMART SMR_2 493 575 IPR002625 -
Spst8g01836 575 Pfam Smr domain 496 562 IPR002625 -
Spst8g01836 575 SUPERFAMILY SMR domain-like 494 575 IPR036063 -
Spst8g01836 575 CDD CUE_CID7_like 223 265 IPR041806 -
Spst8g01836 575 SMART DUF1771_2 415 480 IPR013899 -
Spst8g01836 575 MobiDBLite consensus disorder prediction 1 23 - -
Spst8g01836 575 Pfam Domain of unknown function (DUF1771) 416 479 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01836 Spst-Chr8 22226295 22233558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01836 - - gmx:100796128 964.14