Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01806 ATGTTCACATCCACCCACTTGAACAGCAACAGCGACACCACCTTTCTCTCCGTCGGTGGCGGTGGCAAGTGCAAGTTCTGGTTAATGGCCTCCGTCGCCTCGCCCTCTACTCCGGCGGTGGTTTTCACCGCCCTCGCCGGCGTCGCCATCGTCGCCGTGATTTTCTACGGCGCCAGTAGGGGCCGGCTTAAATCACCATGGTCGCAAAGGAAAAGAAAACACGTTCTGTCACCTCAGCAATGGAAATGCATGTTTACAGAAGATGGTAGATTCTATGATGGTGGAAATAAGTTCCTCAAAAGAGTGCGCAGTGGAGGTGTTGATCCTAGTATCAGGGCTGAGGTTTGGCCATTCCTACTTGGAGTGTATGACTTAGACAGCAGCAAAGACGAAAGAGATGTTATAAGAACTCAAAATAGAAAGCAGTATGAGAAGCTCCGCAGACAATGTAGGAAGCTCTTCAAGCAAAGCAATGAGAGAAATAAGTTAAATGAAGTTGGTGAAATCAGCTATGAGGGTGATGGTAGAAGTTTGTGTCAAGATTCTGGTTCTGCTAGTTCTGATGATGTAGTCAGTGCTAGGGAATCTCTCTCTAGTGAGGATAAGAGCGCTGATGTTGAACATTCTGACAATCCATCCAGTGCCCTGTTGGAAGGAGACGACATTCATACTGTGAACAACGCTGATGTCTCTACACTGGATACTGATTTCTCTGATTCAGACTCCTTTGAAGAAGGTTCTGAAGTAATTCAGACAGTTCCTTCTGATGATATTGAGGAATATAACAATCCAGACAACGCTCCCAAGGAAGTATCTTCTCCCTCCAAAGACAAAATCCCATCAAAGCCGCCAACTAATGAAGATTTTTCCACCTGGCAACGAATTATCCGACTTGATGCAATACGTGCCAATGCTGAATGGATGTCATGTTACCCGTCTCAAGCCTCCGTACCAGACAGCAGGGCCCGTCGAACTGCTGAGGCTGTTGGCTTGAGGGATTATGGTCACCTAGAGGCTGGCAGAATTTTCCATGCTGCCCGACTAGTTGCTATTCTTGAAGCATATGCACTATATGACTCTGACATTGGCTACTGCCAAGGTATGAGTGACCTGCTATCTCCTATAATTAGTGTTATATCAGAGGATCATGAGGCTTTCTGGTGTTTTGTTGGATTCATGAAGAAGGCACGGCAAAATTTTAGGCTTGATGAAGTGGGTATTCGCAGGCAACTGGACTTGGTCGCAAAAATAATAAAGTTTAAGGATGCCCATCTTTTTAGGCATTTGGAAAAGCTTCAGGCTGAGGATTGTTTTTTTGTCTATAGAATGGTGGTGGTAATGTTTAGAAGGGAGCTGACATTTGAACAAACCCTTTGCCTATGGGAAGTGATGTGGGCAGATCAAGCGGCAATAAGGGCAGGTACTGGGAAATCTGCATGGAGCAGAATTAGGCAGCGTGCACCACCAACAGAAGATTTATTGCTTTATGCAATAGCAGCTTCGGTGTTGCAGAAAAGGAAATTGATCATTGAAAAGTATAGCAGCATGGATGAAATCATTAAGGAATGCAATAGCATGGCAGGTCAACTTGATGTTTGGAAACTGCTTGATGATGCACATAACCTAGTGGTCACGCTTCATGACAAAATAGAGACATCATTCTCATGA 1668 0.4508 MFTSTHLNSNSDTTFLSVGGGGKCKFWLMASVASPSTPAVVFTALAGVAIVAVIFYGASRGRLKSPWSQRKRKHVLSPQQWKCMFTEDGRFYDGGNKFLKRVRSGGVDPSIRAEVWPFLLGVYDLDSSKDERDVIRTQNRKQYEKLRRQCRKLFKQSNERNKLNEVGEISYEGDGRSLCQDSGSASSDDVVSARESLSSEDKSADVEHSDNPSSALLEGDDIHTVNNADVSTLDTDFSDSDSFEEGSEVIQTVPSDDIEEYNNPDNAPKEVSSPSKDKIPSKPPTNEDFSTWQRIIRLDAIRANAEWMSCYPSQASVPDSRARRTAEAVGLRDYGHLEAGRIFHAARLVAILEAYALYDSDIGYCQGMSDLLSPIISVISEDHEAFWCFVGFMKKARQNFRLDEVGIRRQLDLVAKIIKFKDAHLFRHLEKLQAEDCFFVYRMVVVMFRRELTFEQTLCLWEVMWADQAAIRAGTGKSAWSRIRQRAPPTEDLLLYAIAASVLQKRKLIIEKYSSMDEIIKECNSMAGQLDVWKLLDDAHNLVVTLHDKIETSFS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01806 555 Gene3D - 404 551 - -
Spst8g01806 555 MobiDBLite consensus disorder prediction 194 208 - -
Spst8g01806 555 FunFam Ypt/Rab-GAP domain of gyp1p superfamily protein 270 400 - -
Spst8g01806 555 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 65 523 - -
Spst8g01806 555 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 81 428 IPR035969 -
Spst8g01806 555 MobiDBLite consensus disorder prediction 173 288 - -
Spst8g01806 555 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 405 543 IPR035969 -
Spst8g01806 555 MobiDBLite consensus disorder prediction 177 193 - -
Spst8g01806 555 ProSiteProfiles TBC/rab GAP domain profile. 106 468 IPR000195 -
Spst8g01806 555 SMART tbc_4 103 513 IPR000195 -
Spst8g01806 555 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 273 400 - -
Spst8g01806 555 Pfam Rab-GTPase-TBC domain 347 467 IPR000195 -
Spst8g01806 555 FunFam GTPase-activating protein gyp7 isoform X1 404 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01806 Spst-Chr8 21855859 21859388 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01806 - - gmx:100789579 944.495