Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01805 ATGGCCATCATCGCCGATTACCAAGAAGAGGAGCAGAGCAACGCGACTTGCTCAGGAGCCTCTGCCTTGTCAAAATCACAACCTCATTCGTTCAGCGCCAATTTTGATCCCTCCAACCCTCGAGATTTTCTGCACAAGGTATTTGATTTCGTCGCCCAAACAAGCGACTTCTTCCAAAAGGACACAGCTGTGGAAGAGGTTGTGTCTGCGGCGAGTGCCGCCAAGGTGAAGGCGGCTGCGAAATCGGCGGAGAAGAAAAGGAAGGAAGTGGAAGCTTCTAAGAAGGAGGCAGCAGCAGTGGAGAAGAAGAAGGAGGAAGTAGAAGTCTCCAAGGAGGAGGCGACGGCAGTGGAGAAAAAGAAGGACCAAGAGAGCACTTCAGTAGTACCAAACATAGGTAATGGTCTGGATCTAGAAAAATACTCCTGGACTCAAACTCTGCAGGAGGTCAATGTGAGTGTTCCTGTGCCTACTGGAACGAAATCTAGGTTTGTCATCTGCGATATAAAGAAGAACCATCTAAAAGTTGGACTCAAAGGCCAACCACCAATCATTGATGGTGAGCTATATGGATCTTTAAAGCCAGATGACTGTTATTGGAGCATAGAGGATCAGAATACAATTTCTATTCTTTTGACCAAGCATAATCAAATGGAGTGGTGGAAATGTGTTGTAAAGGGTGATCCTGAAATTGATACCCAAAAAGTAGAGCCTGAGAACAGCAAACTTGCTGACCTCGATCCTGAAACTCGACAGACTGTTGAAAAAATGATGTTTGATCAGAGGCAGAAGTCTATGGGCCTCCCTACTAGTGATGAACTCCAGAAGCAAGAAATCTTGAAGAAATTTATGAATGAGCATCCAGAGATGGACTTCTCAAGGGCAAAAATATCATAA 897 0.4526 MAIIADYQEEEQSNATCSGASALSKSQPHSFSANFDPSNPRDFLHKVFDFVAQTSDFFQKDTAVEEVVSAASAAKVKAAAKSAEKKRKEVEASKKEAAAVEKKKEEVEVSKEEATAVEKKKDQESTSVVPNIGNGLDLEKYSWTQTLQEVNVSVPVPTGTKSRFVICDIKKNHLKVGLKGQPPIIDGELYGSLKPDDCYWSIEDQNTISILLTKHNQMEWWKCVVKGDPEIDTQKVEPENSKLADLDPETRQTVEKMMFDQRQKSMGLPTSDELQKQEILKKFMNEHPEMDFSRAKIS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01805 298 MobiDBLite consensus disorder prediction 8 36 - -
Spst8g01805 298 Coils Coil 73 120 - -
Spst8g01805 298 CDD p23_NUDC_like 141 225 - -
Spst8g01805 298 MobiDBLite consensus disorder prediction 83 125 - -
Spst8g01805 298 Gene3D - 133 259 IPR008978 -
Spst8g01805 298 SUPERFAMILY HSP20-like chaperones 127 240 IPR008978 -
Spst8g01805 298 PANTHER NUCLEAR MOVEMENT PROTEIN NUDC 27 294 IPR037898 -
Spst8g01805 298 MobiDBLite consensus disorder prediction 83 128 - -
Spst8g01805 298 ProSiteProfiles CS domain profile. 136 225 IPR007052 -
Spst8g01805 298 MobiDBLite consensus disorder prediction 9 36 - -
Spst8g01805 298 FunFam Nuclear migration protein nudC 132 259 - -
Spst8g01805 298 Pfam CS domain 140 214 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01805 Spst-Chr8 21844468 21851683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01805 K25866 - tpra:123893469 370.548