Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01791 ATGGACACCACAAAACCTCTCATCGAACTGGAGCTTGACGACGATGGCAGAATCAGAAGAACTGGGAATGTGTTGACGGCAAGCACACACATCATAACTGTGGTGGTAGGGGCAGGGGTGCTGGCTCTGGCATGGGCCATGGCACAGCTAGGATGGATAGCTGGGATAGGAAGTATCATCACCTTTTCATCTATCTCCATTTTCACTTACAGTCTTGTAGCCGATTGTTACAGGTATCCAGACCCTGTCACTGGCAATAGAAATTATACTTATATGCAAGCTGTCAAGGCTTACTTAGGTGGAACAATGCATGTGGCTTGTGGATTGGTTCAATATACCAAGCTGGCTGGGATCACAGTGGGCTACACAATAACTTCCTCCACAAGCTTGGTGGCAATAAGGAAAGCAATTTGTTTCCACAACAAAGGAAATGCAGCTTCATGCAAGTTTTCGAATAATCCCTTCATGATCGGTTTTGGGATTTTGCAAATTTTCTTGTCTCAGATACCAAACTTTCACGAGCTTACATGGCTCTCAACTGCTGCTGCCATCACCTCTTTTGGTTACGTATTCATTGGTAGTGGGTTATGTCTCTCGGTCATCCTCTCAGGAAAAGGAGCTGCAACCAGCATAACAGGAACCAAACTACCTTTAGAAGATAAACTTTTGAAGGTTTTCACAGCAATGGGAAACATAGCTCTTGCATGCACTTACGCTACTGTTATTTATGATATAATGGACACATTAAAGTCACATCCAGCAGAAAATAAACAAATGAGAAGGGCGAACGTGCTAGGGGTGACAGCAATGACAATATTGTTCTTGCTATGCAGTGGCCTTGGCTATGCTGCTTTTGGTGACAACACACCTGGGAACATCTTGACCGGATTTACCGAACCCTTCTGGTTGGTCGCACTGGGGAACGGATGCATCATAATCCACATGATTGGAGCATATCAGGTGATGGGTCAACCATTCTTTCGTATTGTTGAAATGGGTGCCAACATGGTGTGGCCGCATTCAGATTTCATAAACAAGGAATATCCATTCATGATAGGCAGTGTAATGGTTCGTTTCAACTTGTTTAGGCTAGTTTGGAGGACCATTTTTGTGATATTGGCCACAATCCTTGCCATGATAATGCCATTTTTCAGTGAGGTTCTTTCCCTTCTTGGAGCAATTGGGTTCGGGCCCCTAGTTGTCTTTTTCCCCATACAAATGCACATTGCGCAGAAACAGATTAGAAAACTATCACTCAGGTGGTGCTGCCTCCAATTTTTAAGTTGCCTGGGCTTCGTTATTTCACTGGCTGCTGTAGTCGGTTCAATTCATGGGATTATTCTGGATTTCTATAAAACCAACCTTTTCATGTATAAACAATAG 1383 0.4367 MDTTKPLIELELDDDGRIRRTGNVLTASTHIITVVVGAGVLALAWAMAQLGWIAGIGSIITFSSISIFTYSLVADCYRYPDPVTGNRNYTYMQAVKAYLGGTMHVACGLVQYTKLAGITVGYTITSSTSLVAIRKAICFHNKGNAASCKFSNNPFMIGFGILQIFLSQIPNFHELTWLSTAAAITSFGYVFIGSGLCLSVILSGKGAATSITGTKLPLEDKLLKVFTAMGNIALACTYATVIYDIMDTLKSHPAENKQMRRANVLGVTAMTILFLLCSGLGYAAFGDNTPGNILTGFTEPFWLVALGNGCIIIHMIGAYQVMGQPFFRIVEMGANMVWPHSDFINKEYPFMIGSVMVRFNLFRLVWRTIFVILATILAMIMPFFSEVLSLLGAIGFGPLVVFFPIQMHIAQKQIRKLSLRWCCLQFLSCLGFVISLAAVVGSIHGIILDFYKTNLFMYKQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01791 460 PANTHER OS05G0424000 PROTEIN-RELATED 25 443 - -
Spst8g01791 460 Pfam Transmembrane amino acid transporter protein 21 447 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01791 Spst-Chr8 21574472 21580641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01791 11 447 Organic Solute Cotransporters AT1G10010 51.802 6.40e-170 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01791 K24917 - gmx:100810628 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01791 8 21574472 21580641 Spst8g01791 8 21574472 21580641 ECH