Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01790 ATGGCGATTGAGATCACTGAGCTGGAAAAGGTTGAAAACTCTGGATTATCTGTAAATGGAAATGATGAACTGCTAGATGATGATGGCAAGCCAAGAAGAACAGGGACAGTATGGACTGCAACTGCACATATAATAACAACAGTTATTGGAGCTGGGGTGCTTTCTTTGGCCTGGTCCATGGCTCAATTGGGATGGATCATAGGTGTTTCTTCCATCTTTGTAATTGCCAGTGTTACACTCTACACTTCCAATCTTCTAGCTGATTGTTACAGATCACCACATCCTGTCACTGGTAGGAGGAATCACACTTACATGGAGACTGTGAAAACCCACTTAGCATCAATTACGTCTTTTGGTTATGCATTTATTGGCGTTGGACTTTCTGTTGCTACCATCATTCAAGGGAGTGAAACAGGAAGAGAAAGGAGTACCTTTTTGTTTGGGGGAAGCAAGGAGCAACACATTGCAGACAAAGTATGGAATATGCTGGTGGCACTAGGAAATATTGCACTTGCCAGCAATTACGCTGTAATTGCTATAGATGTCCAGGACTCTCTAAAGTCATCACCACCGGAGAATAAAGTGATGAAGACGGCGAACAGGATAGGAATGTTGACGATGGTAATCATCTTTCTGTCATCTGCTTGCTCTGGCTATGCAGCGTTTGGCTTTCACACTCCTGGTAGCATCCTTATGAGCTCTGGATTTAAAGACCCTTTTTGGCTTGTTGACTTGGCCAATGCCTTCATCGTTGTGCATCTAGTTGGAGCATATCAGATAATTACCCAACCAATTTTTGGTGTGGTGGAAACTTGGGCTAAACAAAGGTGGCCAGAATCAAAATTTGTGAGAAAGGAGTACACAATCAACATTGGAAAAATGAAGTTTAGCTTGAATTTATGTAGGGTGGTTTGGAGGACCATGTTTGTGATGGTGGCAACCATTTTGGCCATGGCAATGCCCTTTTTCAATGAAATGCTTGCCTTTTTGGGGGCTACGGCGTTTTGGCCCTTGGTCATCTATTTTCCAGTTGAAATGTTCATTGCCAAAGAAAGGATGAAGAAAAGAACAATTAAATGGTTTGGACTTCAAACAATGAATGTTTCTTTCCTGATATTGTCAATGGCTATTGCATTTGCAGCTATTCGAGGGTTGGGCGAAGCTCTTCTTAAATACAAACCCTTCATGTATAAAATGTAG 1200 0.4192 MAIEITELEKVENSGLSVNGNDELLDDDGKPRRTGTVWTATAHIITTVIGAGVLSLAWSMAQLGWIIGVSSIFVIASVTLYTSNLLADCYRSPHPVTGRRNHTYMETVKTHLASITSFGYAFIGVGLSVATIIQGSETGRERSTFLFGGSKEQHIADKVWNMLVALGNIALASNYAVIAIDVQDSLKSSPPENKVMKTANRIGMLTMVIIFLSSACSGYAAFGFHTPGSILMSSGFKDPFWLVDLANAFIVVHLVGAYQIITQPIFGVVETWAKQRWPESKFVRKEYTINIGKMKFSLNLCRVVWRTMFVMVATILAMAMPFFNEMLAFLGATAFWPLVIYFPVEMFIAKERMKKRTIKWFGLQTMNVSFLILSMAIAFAAIRGLGEALLKYKPFMYKM 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01790 399 PANTHER OS05G0424000 PROTEIN-RELATED 35 112 - -
Spst8g01790 399 Pfam Transmembrane amino acid transporter protein 114 382 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01790 Spst-Chr8 21550391 21552921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01790 23 395 Organic Solute Cotransporters AT5G63850 36.761 2.59e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01790 K24917 - cpap:110822058 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01790 8 21550391 21552921 Spst8g01790 8 21550391 21552921 ECH