Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01789 ATGAATGAAGTGGAGGATGTTGCAGGGGCGATTAAAGGTGGTGTTGATTCACTTCTGGACGATGATCGCAAACCCAGAAGACACAGTGACAAGTTTAAGCTTGGAAGAGAAATAAGCAGGGACAGCATGGACAGGAAGTGCACATATAATAACAGCAGTGATTGGTGCTGGAGTGTTGTCTATTCCTTGGGTCATGGCACAATTGGGATGGATAATTGGCATATTCTCAATCTTGCTCCTTGCAAGTGGAAAGGAAAGAGTACCTCTTTAATGTGGGGCAGCAAGATTCAAAGTCCATCACACTTCTGGAATATTCTCATTGCACTTGGAAACATTGCACTTGCTAGTTCCTATTCTCAAATTGGTGTAGATATTCAGGACTCTTTGAAATCATCACCACCTGAAAATAAAGTGATGAAGACGGCAAATAAGATAGGCGTAGGCACTATGACAACTTTTTTCCTGCTATGTGGATGCTCTGGTTATGCAACATTTGGTTCAGACACACCTGGAAACATCCTACTCAGTTCTGGGTTAGGATACATTGCCTTTCATCTTGTGATACAGTCAAAACATTTTGTTCACAAAGTTCATAGGGTTGCCATCCAACCCATTTTTAGTTTAGTTGAAACATGGGCCAGGCAAAGGTGGGCAAGCTCAGGTTTTGTTCATGGGGAACACCCCATGAGCATGGGGAAAATGAAGATCAAGCTTAACTTCTTCAGGTTAGTTTGGAGGAGCATATTTGTGGTGATATTGACTGTTTTGGCTATGGCAATGCCCTTTTTCAACGAGATGATTGCGCTGTTGGGCCGTAGGGTTCCAGTGGAGATGTACATTACAAGAAAAAAAATCAAAAAGGGAATGAGGTGGTTTGGCCTTAAAACTTTGAGCTTGCTTTTCATGTTACTGGCAGTGGCTAGTGCATGTGCTGCCATTCGAGGCATCTATCAATCTCTTCACAAATACAAGCCCTTCAAGTATAAAGAGTAG 993 0.424 MNEVEDVAGAIKGGVDSLLDDDRKPRRHSDKFKLGREISRDSMDRKCTYNNSSDWCWSVVYSLGHGTIGMDNWHILNLAPCKWKGKSTSLMWGSKIQSPSHFWNILIALGNIALASSYSQIGVDIQDSLKSSPPENKVMKTANKIGVGTMTTFFLLCGCSGYATFGSDTPGNILLSSGLGYIAFHLVIQSKHFVHKVHRVAIQPIFSLVETWARQRWASSGFVHGEHPMSMGKMKIKLNFFRLVWRSIFVVILTVLAMAMPFFNEMIALLGRRVPVEMYITRKKIKKGMRWFGLKTLSLLFMLLAVASACAAIRGIYQSLHKYKPFKYKE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01789 330 PANTHER OS05G0424000 PROTEIN-RELATED 59 309 - -
Spst8g01789 330 Pfam Transmembrane amino acid transporter protein 96 272 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01789 Spst-Chr8 21541437 21546716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01789 58 327 Organic Solute Cotransporters AT1G10010 35.616 1.23e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01789 K24917 - gmx:100790298 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01789 8 21541437 21546716 Spst8g01789 8 21541437 21546716 ECH
Spst9g00993 9 8837512 8840790 Spst8g01789 8 21541437 21546716 PCT