Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01767 ATGTTCCCAATTTCGCCTGAATTTCGATATTTTCCCGAATGTCGTTTGGAATGGGTTGTTCAATTTTGGGATGAAACCTTCACTTTGGGTTTAAGAAATGAACCAAAATTTTGGGATGAAAATTTACTTGGGTTTAAGAAATGTCCCTCTTGCAGTGGAGATATTCATGCCGACAGCTTGCCTGCAAGAATGGGGTGGGGAGATATTTACAGAAGACGAGTTAGAGTATTTACAATGGCCATAGTAATATACCTAGATTATAAGGGTATACAACAACGAGATAAATGGACTAGCAAATCTAAACAAGATGCATTGTGGGAGAAGGCTCACGAGCGTAATGCTAAGCGTGTTCTAAATTTGATAATAGAGATGGAAGGCCTATGGGTTAAACTTGGGCAATACATGTCAACCCGGGCAGATGTGCTTCCTGCTGCTTATATACGTCTTTTGAAGCAGTTACAAGACTCTCTTCCTCCTCGACCCTTAGAAGAGGTCTATGGCACCATACAGAAAGAGTTGGGGAAATCAATGGATGAGTTATTTGCTGATTTTGTCAACGAACCTTTGGCGACGGCATCAATAGCACAAGTGCATCGTGCGACTCTGCTCAATGGACAGGAAGTGGTAGTTAAAGTTCAACATGATGGTATCAAGACAGTTATACTGGAGGACTTAAAAAATGCAAAGTCAATTGTTGACTGGATTGCATGGGCTGAGCCACGATATAACTTTAACCCTATGATTGATGAATGGTGCAAAGAAGCTCCTAAGGAACTTGACTTCAATCATGAAGCTGGGGGTGATGGTGGTGAAAACACTAGAACGGTGGCTAAAAATCTTGGTTGCAGAAACCGATATGATGGAAATATGAGTGGCAATAGAGTGGATGTTTTGATACCAGATGTAATTCAGTCTACAGAAAAAGTCCTTGTTTTGGAGTACATGGATGGCATTCGGTTGAATGATTTAGAATCACTAGAAGCTTTTGGAGTAAATAAACAAAAGCTTGTTGAGGAGATTACTCGTGCCTATGCCCACCAAATATATGTTGATGGGTTTTTCAATGGTGATCCACATCCAGGAAATTTTCTTGTGAGCAAGGAATCTCCTCATCGTCCCATTTTACTTGACTTTGGGCTTACAAAGAAACTATCAAGCACCATAAAGCAAGCACTTGCGAAGATGTTTTTGGCATCTGCTGAGGGCGACCATGTGGCCCTTCTATCTGCATTTGCAGAAATGGGGCTTAAGTTGCGACTGGACATACCAGAGCAGGCAATGGAAGTAACTACTGTATTCTTTCGTGCCACAACACCGGCAAATGAATACCATAAAACAATGAAATCCCTATCCGACCAAAGGGATAGAAATATGAAGGTTATACAGCAGAAAATGAACCTTGACAAAAAGGAAATGAAACGCTTTAATCCTGTTGATGCATTTCCTGGTGATATTGTAATATTTGGAAGAGTTCTTAATCTTCTAAGAGGTCTGCTGTTTTCCACTATGATACCATTGTATATTAGTCGAGGACCATCAGTAAATGACAGATGGATTTTTGATTCACCAGTTCATTCTGATGTAGAATCCAAACTGAGGCAGCTTTTAATTGAGATGGGAAATAAAGATAAAATACTTGGAATCCAGGTATGTGCCTACAAAGATGGAGAGGTCATTATTGACACCGCTGCAGGAGTGCTTGGTAAATATGATCCACGTCCGGTTAAGCCTGATAGTCTTTTTCCCGTGTTCTCTGTTACAAAGGGTATCACAGCAGGAATGATACATTGGATGGTTGACAAAGGACAACTAAAGCTAGAAGAGAATGTAGCAAATATATGGCCAGCATTTGGATCAAATGGGAAGGATGTCATTAAGGTTCATCATGTGCTGAACCATACATCTGGTTTGCACAATGCAATGGGAGACATAGCTCAAGAAAACCCTCTTCTAATGTTTGATTGGGATGGATGTTTAAATTGCATTAGTCAGTCAGTACCTGAGACTGAACCAGGCAAGGAGCAGTTTTATCATTATTTATCATTTGGCTGGTTGTGTGGTGGAATCATTGAGAATGCATCTGGCAAGAAATTTCAGGAGATTCTTGAAGAAGCAATAGTTCGTCCCCTCCATATTGAAGGGGAGCTATATGTAGGGATTCCGCCAGGTGTGGAATCACGTCTTGCAGCTTTGACTGTAGATACAGCTGATTTAAGCAACCTCTCAGCACTCAGTAATCGTTCTGACCTTCCCTCTACCTTCCAACCACAGCAAATTGCTCAAATGGCAACCACTTTACCAGTTGTTTTCAATACTCTGAATGTTCGCCGTGCGATCATACCAGCAGCCAATGGACATTTATCTGCCCGGGCACTTGCACGTTATTATGCAGCCCTAGCTGATGGTGGCAAGATACCACCACCTCATTCTTCTGCTTCTAAGCCAGTACTTGGAAGCCATCCTCATATCCCCAAATTATCTTCTTCCGGGAAAGCCCCCAAAAAGCGAAAATGCATTGGACGGAAGAAATCAGGTAGTACTACAGCAAATTATGAAAAGGTTTCTAGTTTTGATGATTTGGAGGCTGATGAGCGCAGCAATGCTAACAGAGAAAGTAACAGTAGTGATGATACAAGTAGTGGCGGAATCGATAAGAATCTGAGAACCCATGCTTCTGATAATGTCTACAGGAATCCTAGGATTATAGATGAATTCTTGGGTACAGGAGACTACAAGAATTTAGCTTTGCCAAATGGAGGTTTTGGCTTAGGATTTAAGAGGTTTACTTCTAAGGATGGATCATCAATTGCCTTTGGTCACTCGGGAATGGGTGGGTCCACAGGGTTTTGTGATGTCACCAATAAGTTCTCTATTGCTGTGACACTGAACAAAATGTCCTTTGGAGGTGTCAGCGCAAAAATTGTCCATCTTGTATGTTCAGAGTTAAATATTCCTGTTCCGGATGATTTCCTGAGATTTGCGGTAGAGCATAGGGGAGAGGATGGCCAATCACATATGGGGAGGCCCATCATTAATTAA 3039 0.4149 MFPISPEFRYFPECRLEWVVQFWDETFTLGLRNEPKFWDENLLGFKKCPSCSGDIHADSLPARMGWGDIYRRRVRVFTMAIVIYLDYKGIQQRDKWTSKSKQDALWEKAHERNAKRVLNLIIEMEGLWVKLGQYMSTRADVLPAAYIRLLKQLQDSLPPRPLEEVYGTIQKELGKSMDELFADFVNEPLATASIAQVHRATLLNGQEVVVKVQHDGIKTVILEDLKNAKSIVDWIAWAEPRYNFNPMIDEWCKEAPKELDFNHEAGGDGGENTRTVAKNLGCRNRYDGNMSGNRVDVLIPDVIQSTEKVLVLEYMDGIRLNDLESLEAFGVNKQKLVEEITRAYAHQIYVDGFFNGDPHPGNFLVSKESPHRPILLDFGLTKKLSSTIKQALAKMFLASAEGDHVALLSAFAEMGLKLRLDIPEQAMEVTTVFFRATTPANEYHKTMKSLSDQRDRNMKVIQQKMNLDKKEMKRFNPVDAFPGDIVIFGRVLNLLRGLLFSTMIPLYISRGPSVNDRWIFDSPVHSDVESKLRQLLIEMGNKDKILGIQVCAYKDGEVIIDTAAGVLGKYDPRPVKPDSLFPVFSVTKGITAGMIHWMVDKGQLKLEENVANIWPAFGSNGKDVIKVHHVLNHTSGLHNAMGDIAQENPLLMFDWDGCLNCISQSVPETEPGKEQFYHYLSFGWLCGGIIENASGKKFQEILEEAIVRPLHIEGELYVGIPPGVESRLAALTVDTADLSNLSALSNRSDLPSTFQPQQIAQMATTLPVVFNTLNVRRAIIPAANGHLSARALARYYAALADGGKIPPPHSSASKPVLGSHPHIPKLSSSGKAPKKRKCIGRKKSGSTTANYEKVSSFDDLEADERSNANRESNSSDDTSSGGIDKNLRTHASDNVYRNPRIIDEFLGTGDYKNLALPNGGFGLGFKRFTSKDGSSIAFGHSGMGGSTGFCDVTNKFSIAVTLNKMSFGGVSAKIVHLVCSELNIPVPDDFLRFAVEHRGEDGQSHMGRPIIN 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01767 1012 SUPERFAMILY beta-lactamase/transpeptidase-like 527 809 IPR012338 -
Spst8g01767 1012 MobiDBLite consensus disorder prediction 806 887 - -
Spst8g01767 1012 MobiDBLite consensus disorder prediction 856 871 - -
Spst8g01767 1012 MobiDBLite consensus disorder prediction 872 887 - -
Spst8g01767 1012 Pfam ABC1 atypical kinase-like domain 152 407 IPR004147 -
Spst8g01767 1012 Gene3D - 888 983 IPR012338 -
Spst8g01767 1012 Gene3D - 527 820 IPR012338 -
Spst8g01767 1012 CDD ABC1_ADCK3-like 152 411 - -
Spst8g01767 1012 PANTHER ABC1 FAMILY PROTEIN 61 721 - -
Spst8g01767 1012 SUPERFAMILY Protein kinase-like (PK-like) 154 382 IPR011009 -
Spst8g01767 1012 Pfam Beta-lactamase 534 810 IPR001466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01767 Spst-Chr8 21254758 21267920 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01767 K08869 - gmx:100802638 1693.32