Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01745 ATGTCGAACGCTTTATCTTTCACACTCCCCGCTCTAAACAACCCTCAGATAAACGCTTTCAACAACCCTAACAAAACGCGCTTGCTTCTGAGAAGCAGGGCTGCAAGATGCTTGACCTCTATCGTAGAGAAGAAAAGACTGTTTGGAGCACCGGTGCGGTCGAGTGGGTTGGACCGGATCCGGTTGCTGCAATCAGGGCGGTTGCCCAAATGGAGGGTAGCTGTCAGGTCTGCATTCTCTGCCGTGCCGGAGAAGCCGCTGGGGCTGTATGATCCGGCGATGGACAAGGACTCGTGCGGGGTGGGGTTTGTGGCGGAGTTGTCGGCCGAGTGTAGCCGCAAAACGGTAACCGACGCGCTGGAAATGTTGGTGAGGATGACGCACAGAGGTGCTTGTGGATGCGAACCCAACACTGGAGATGGTGCAGGCATTCTAGTTGCTCTGCCTCATGTCTTTTACCAGGAGGTTGTGGAATTTGAGCTTCCTCCCCAGGGAAAATATGGAGTTGGCATGTTTTTCTTGCCAAAGTCTGAAAATCGAAGGGAGGAAAGCAAAAAATTATTTGGCAAGGTTGCTGAATCTCTGGGGCACACTGTTCTTGGTTGGCGGTCTGTGCCCACTGATAACACAGGATTGGGCAAATCAGCCCTGCAGACTGAACCAGTGATTGAACAGGTGTTTCTTACGCCAAGTGCTCAATCAAAAGTTGATTTGGAAAGACAGATGTACATATTAAGGAAGCTCAGCATGGCAGCTATTGCATCTGCATTAAACCTCCAAAATGATGGCATTACTGATTTCTATATCTGTTCACTTTCATCAAGGACTGTTGTTTACAAAGGTCAGCTAACACCAGCTCAGTTGAAGGATTATTATTTTGCTGATCTTGGCAATGAAAGGTTTACGAGCTACATGGCCCTGATACATTCACGGTTTTCTACAAATACTTTTCCTAGCTGGGATCGTGCTCAACCGATGCGCGTATTAGGACACAATGGGGAAATCAACACACTCAGAGGCAATGTTAATTGGATGAAGGCACGTGAGGGTTTACTAAAGTGCAAGGAGCTTGGTTTACCAGAGAATGAATTAAAGAAGCTTTTGCCCATAGTGGATGCATGTTCATCGGATTCAGGAGCTTTTGATGGTGTGCTTGAATTTTTGCTTCATTCAGGAAAAAGTCTTCCTGAAGCTGTTATGATGATGATTCCTGAAGCATGGCAAAATGACAAGAACATGGATTCTCAGCGTAAAGCATTTTATGAATATTTCTCAGCTCTCATGGAGCCATGGGATGGGCCAGCTCTTATATCATTTACCGATGGTCACTACCTTGGAGCTACTTTGGATAGGAATGGACTGCGACCAGGCCGTTTCTATGTCACCCATAGTGGACGAGTTATAATGGCAAGTGAAGTTGGGGTTGTAGACATTCCACCAGAAGATGTGTGTAGGAAAGGTAGACTAAATCCTGGCATGATGCTTCTGGTTGATTTTGAGAAGCATGAAGTTGTAAATGATGATGCCTTAAAAGAGCAGTACTCATTGGCAAGACCCTATGAGGATTGGCTCAAAAATCAGAAAATTGAACTTAAAGACATCGTTGACTCTGTTCCTAAATCTGAAAGAGTACCACCACCTATAGCAGGAGTGGCTCCACTAGACAATGATGATGTGGATATGGAAAATATTGGCATTCATGGCTTAGTGGCTCCATTGAAAGCTTTTGGATATTCAGTTGAATCACTGGAAATGCTATTACTTCCTATGGCCAAGGATGGTGTAGAAGCCCTTGGGTCAATGGGAAATGATACACCACTAGCTGTCATGTCTAATAGAGAAAAACTCACTTTTGAATATTTCAAGCAAATGTTTGCTCAAGTTACAAACCCTCCTATTGATCCTATTAGAGAGAAAATAGTCACTTCTATGCAATGTATGGTTGGTCCAGAGGGCGATCTGACAGAAATCACTGAGGAGCAATGCCACCGCCTTTCCCTCAAAGGTCCCCTTTTATCCACTGAAGAAATGGAAGCCATAAAAAATATGAATTATAGGGGATGGCGCAGCAAAGTTATAGACACAACGTACGCAAAGGAGCGTGGTCAGAGAGGGTTGGGGGAAGCCTTGGACAGGATATGTGAGGAAGCACATGATGCAATTAATGAAGGCTATACCACACTTGTGCTGTCTGATAGAGCCTTCTCAAGGAAACGTGTTGCTGTGAGCTCCCTCCTGGCTGTTGGTGCTGTCCATCAACACCTAGTTAAAACACTTGAGCGCACTAGAGTTGCCTTAATAGTTGAATCTGCTGAGCCACGTGAAGTGCATCATTTCTGCACACTTGTTGGTTTTGGTGCTGATGCTATATGCCCATATTTGGCTCTGGAGGCAATTTGGCGACTGCAAGTTGATGGAAAGATCCCACCAAAAGCAAGTGGTGAGTTCCACTCAAAAGAAGAGTTGGTCAAGAAGTATTTCAAAGCAAGCAACTATGGAATGATGAAGGTTCTTGCCAAGATGGGAATATCAACTTTGGCATCATACAAAGGTGCTCAGATTTTTGAAGCTCTGGGTCTTTCATCGGAAGTGATTGAAAAGTGCTTCGCTGGAACTCCAAGTCGAGTTGAGGGTGCAACATTCGAGACACTTGCTCGTGATGCTTTACAACTGCATGAGTTGGCTTTTCCTTCCCGTTTTTTCTCTCCTGGAAGTGCAGAAGCTGTAACTTTACCAAATCCTGGTGATTATCACTGGAGAAAGGGTGGTGAAGTTCACCTGAATGATCCTCTTGCTATAGCAAATCTTCAAGAGGCTGCCAGAACTAACAGTGTAGATGCATATAAACAGTATTCCAAGCTCATTCATGAATTGAACAAGGCTTGCAATTTGCGTGGACTTCTGAAATTTAAAGAGGCGACTGTTAAAATTCCTATTGATGAAGTGGAGCCTGCTAGCGAAATAGTAAAACGGTTTTGCACTGGGGCCATGAGTTATGGGTCAATATCATTGGAGGCACACACAACATTAGCAATGGCTATGAATAAAATTGGAGGGAAATCTAATACAGGTGAGGGAGGCGAGCAACCATCTCGTATGGAGCCTCTTCCTAATGGCACAATGAATCCCAAAAGAAGTGCCATTAAGCAAGTGGCTAGTGGGAGATTTGGAGTTTCAAGTTACTACCTTACAAATGCTGATGAACTGCAGATAAAAATGGCCCAGGGAGCAAAACCTGGTGAGGGAGGTGAACTTCCTGGGCACAAGGTTATAGGAGACATTGCGGTTACTAGGAATTCAACTGCCGGAGTAGGACTTATCAGTCCACCTCCCCATCATGATATTTATTCAATTGAAGACCTTGCCCAACTAATTCATGATCTTAAGAATGCCAATCCATCTGCTCGGATTAGCGTGAAGTTGGTATCTGAAGCAGGAGTGGGGATAATTGCTAGTGGAGTTGTTAAAGGCCATGCCGACCATGTGTTGATCTCGGGTCATGATGGAGGTACTGGGGCATCTAGATGGACTGGCATAAAGAATGCTGGGCTGCCTTGGGAACTTGGCCTGGCTGAGACCCACCAGACTTTGGTTGCTAATGATCTACGTGGTCGCACAGTCCTCCAAACGGATGGGCAACTAAAAACTGGGAGAGATGTGGCCATCGCTACTCTGCTTGGTGCAGAAGAGTTTGGTTTCAGTACTGCTCCGCTCATCACTCTCGGCTGCATCATGATGCGGAAGTGCCACAAGAACACTTGTCCAGTCGGCATTGCTACTCAAGATCCAGTACTCAGAGAAAAGTTTGCTGGAGAACCCGAGCATGTTATCAACTTCTTTTTTATGGTGGCAGAAGAAATGAGAGAAATTATGTCCCAGCTTGGGTTTAGGACAGTTAATGAGATGGTTGGTCGATCTGATATGCTTGAAGTTGATAAGGAAGTCATTAAGAGCAATCAGAAACTAGAGAACATTGACCTCTCTCTAGTGCTTAGACCTGCTGCTGAATTGCGTCCAGAAGCTGCTCAATATTGTGTGCAAAAACAGGATCATGGTTTGGACATTGCCCTGGATAACAAGCTCATAAGTCTGTCCAATGCTGCTTTGGAAAAGGGTCTCCCTGTATACATTGAGACTCCAATCTGTAATGTAAACCGTGCCGTGGGAACTATGCTTAGCCATGAGGTGACTAAACGGTACCACCTAGGTGGTCTTCCAAACGACACCATTCATATCAGATTTACTGGCAGTGCAGGCCAGAGCTTTGGTGCATTCCTCTGTCCTGGTATCACTTTGGAACTTGAAGGTGATAGTAATGATTATGTCGGTAAAGGGTTATCCGGTGGCAAGATTGTAGTGTATCCTCCAAAAGGAAGTAATTTTGACCCTAAGGAGAACATTGTGATTGGTAATGTGGCATTATATGGGGCTACTCAAGGTGAAGCTTACTTCAATGGGATGGCAGCAGAAAGATTTTGTGTTCGTAATTCTGGGGCTAAGGCTGTTGTGGAAGGTGTTGGTGATCATGGGTGTGAGTACATGACTGGCGGGACCGTTGTTGTGCTTGGGGAAACTGGTAGAAATTTTGCTGCAGGTATGAGTGGCGGGATTGCTTATGTTCTTGATTTGTATGGAAAATTCCAATCTCGATGCAACTTGGAACTAGTAGATCTGGATAAGGTTGAAGAGGAAGAGGACATTTTCACACTTAGGATGTTGATACAGCAGCATCAGCGTCACACAAATAGTCTGCTTGCCAAAGAAGTGCTTGATGATTTTGAGAATCTTCTTCCTAAATTTATCAAGGTGTTCCCTCGGGAATATAAACGTGTTCTTGCAAGTATGAAGTCCGAGGAACTGTCCAAAGATGCCATGGTGGATGCAGCAAAGGATGAACAAGAGCAAGATGACGAAGCACAAGCAGTAGAGAAGGATGCTTTTGAAGAACTCAAGAAACTGGCAACTGCATCTTTGAATGAGAAACAGAGTCAGGCTGAGACACCCAAGAGGCCTAGCCGAGCCACTGATGCCATTAAACATAGAGGTTTTATTGCTTATGAGCGCGAGGGTGTTCAGTATAGGGATCCTAATGTTCGCATGGCTGATTGGAAGGAAGTGATGGAGGAGACAAAGCCTGGTCCCCTTCTGAAAACACAGTCAGCCCGTTGCATGGACTGTGGTACCCCTTTCTGTCATCAGGAAAATTCTGGATGCCCTCTTGGAAATAAAATACCAGAATTTAACGAGTTAGTATACCAAAATAGGTGGAAGGAAGCATTAGAGAGGCTTCTTGAAACAAATAACTTTCCGGAATTTACTGGTCGGGTGTGCCCAGCACCTTGTGAAGGTTCTTGTGTGCTTGGTATTATTGAGAATCCCGTATCTATTAAAAGCATTGAATGTGCCATCATAGACAAGGCTTTTGAGGAGGGATGGATGGTGCCACGACCTCCAGTCAAGAGAACTGGGAAAAGAGTAGCCATCGTTGGAAGTGGACCAGCTGGTTTGGCAGCTGCTGATCAGCTAAATAAAATGGGTCATACGGTGACAGTGTATGAAAGAGCTGATAGGATTGGAGGGCTTATGATGTATGGGGTCCCCAACATGAAAACTGACAAAGTGGATGTAGTTCAACGACGAGTGAACCTTATGGCCGAGGAGGGAATAGATTTTGTGGTGAATGCTAATGTTGGAAATGATCCTCTGTACTCTCTTGATCGGCTTCGAGAGGAAAATGATGCCATTGTTTTGGCTGTTGGATCTACAAAACCTAGGGATCTTCCTGTACCTGGTCGAGAGATGTCAGGAGTTCATTTTGCCATGGAGTTTCTCCATGCAAATACTAAAAGCTTGCTTGATAGTAATCTCGAGGATGGTAACTACATTTCAGCCAAGGGAAAGAAAGTTGTGGTCATTGGTGGAGGTGACACTGGCACAGATTGCATAGGAACATCCATTCGTCATGGTTGTAGTAGCATTGTAAATCTTGAACTCCTTCCTCAACCACCACCAACTAGGGCTTCCGGCAACCCATGGCCTCAGTGGCCTCGCATATTCCGAGTGGATTACGGTCACCAAGAGGCTGCAGCCAAATTTGGCAAAGATCCAAGATCGTACGAGGTTCTGACTAAGAGGTTCGTCGGAGATGAAAATGGAGTTGTGAAAGGACTTGAAGTAATTAGCGTCCGCTGGGAAAAGGATGAAACTGGCAAGTTTCAGTTTAAGGAAATCGAGGGTTCGGAGGAGATTATTGAGGCTGACCTAGTTTTACTAGCCATGGGATTCCTTGGTCCCGAGCCTACAACTGCAGAGAAGTTGGGTGTGGAGAGGGACAACAGATCAAACTTCAAGGCTGATTATGGCGGCTTCTCAACTAATGTGAAAGGGGTGTTTGCAGCAGGTGATTGTCGCCGGGGTCAGTCCCTGGTGGTCTGGGCCATTTCAGAGGGACGACAAGCAGCGGCACGGGTGGACAATTACCTCATCAAAGAAGATGAAGAATACAGGAACCAGGATGGGCTTGTCAAGAGGCAGCGGGGCCTCAACAAGAAGCAGCAGGGCGGCAGCAAACACACAGTGATGACTTAG 6588 0.4551 MSNALSFTLPALNNPQINAFNNPNKTRLLLRSRAARCLTSIVEKKRLFGAPVRSSGLDRIRLLQSGRLPKWRVAVRSAFSAVPEKPLGLYDPAMDKDSCGVGFVAELSAECSRKTVTDALEMLVRMTHRGACGCEPNTGDGAGILVALPHVFYQEVVEFELPPQGKYGVGMFFLPKSENRREESKKLFGKVAESLGHTVLGWRSVPTDNTGLGKSALQTEPVIEQVFLTPSAQSKVDLERQMYILRKLSMAAIASALNLQNDGITDFYICSLSSRTVVYKGQLTPAQLKDYYFADLGNERFTSYMALIHSRFSTNTFPSWDRAQPMRVLGHNGEINTLRGNVNWMKAREGLLKCKELGLPENELKKLLPIVDACSSDSGAFDGVLEFLLHSGKSLPEAVMMMIPEAWQNDKNMDSQRKAFYEYFSALMEPWDGPALISFTDGHYLGATLDRNGLRPGRFYVTHSGRVIMASEVGVVDIPPEDVCRKGRLNPGMMLLVDFEKHEVVNDDALKEQYSLARPYEDWLKNQKIELKDIVDSVPKSERVPPPIAGVAPLDNDDVDMENIGIHGLVAPLKAFGYSVESLEMLLLPMAKDGVEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMQCMVGPEGDLTEITEEQCHRLSLKGPLLSTEEMEAIKNMNYRGWRSKVIDTTYAKERGQRGLGEALDRICEEAHDAINEGYTTLVLSDRAFSRKRVAVSSLLAVGAVHQHLVKTLERTRVALIVESAEPREVHHFCTLVGFGADAICPYLALEAIWRLQVDGKIPPKASGEFHSKEELVKKYFKASNYGMMKVLAKMGISTLASYKGAQIFEALGLSSEVIEKCFAGTPSRVEGATFETLARDALQLHELAFPSRFFSPGSAEAVTLPNPGDYHWRKGGEVHLNDPLAIANLQEAARTNSVDAYKQYSKLIHELNKACNLRGLLKFKEATVKIPIDEVEPASEIVKRFCTGAMSYGSISLEAHTTLAMAMNKIGGKSNTGEGGEQPSRMEPLPNGTMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLIHDLKNANPSARISVKLVSEAGVGIIASGVVKGHADHVLISGHDGGTGASRWTGIKNAGLPWELGLAETHQTLVANDLRGRTVLQTDGQLKTGRDVAIATLLGAEEFGFSTAPLITLGCIMMRKCHKNTCPVGIATQDPVLREKFAGEPEHVINFFFMVAEEMREIMSQLGFRTVNEMVGRSDMLEVDKEVIKSNQKLENIDLSLVLRPAAELRPEAAQYCVQKQDHGLDIALDNKLISLSNAALEKGLPVYIETPICNVNRAVGTMLSHEVTKRYHLGGLPNDTIHIRFTGSAGQSFGAFLCPGITLELEGDSNDYVGKGLSGGKIVVYPPKGSNFDPKENIVIGNVALYGATQGEAYFNGMAAERFCVRNSGAKAVVEGVGDHGCEYMTGGTVVVLGETGRNFAAGMSGGIAYVLDLYGKFQSRCNLELVDLDKVEEEEDIFTLRMLIQQHQRHTNSLLAKEVLDDFENLLPKFIKVFPREYKRVLASMKSEELSKDAMVDAAKDEQEQDDEAQAVEKDAFEELKKLATASLNEKQSQAETPKRPSRATDAIKHRGFIAYEREGVQYRDPNVRMADWKEVMEETKPGPLLKTQSARCMDCGTPFCHQENSGCPLGNKIPEFNELVYQNRWKEALERLLETNNFPEFTGRVCPAPCEGSCVLGIIENPVSIKSIECAIIDKAFEEGWMVPRPPVKRTGKRVAIVGSGPAGLAAADQLNKMGHTVTVYERADRIGGLMMYGVPNMKTDKVDVVQRRVNLMAEEGIDFVVNANVGNDPLYSLDRLREENDAIVLAVGSTKPRDLPVPGREMSGVHFAMEFLHANTKSLLDSNLEDGNYISAKGKKVVVIGGGDTGTDCIGTSIRHGCSSIVNLELLPQPPPTRASGNPWPQWPRIFRVDYGHQEAAAKFGKDPRSYEVLTKRFVGDENGVVKGLEVISVRWEKDETGKFQFKEIEGSEEIIEADLVLLAMGFLGPEPTTAEKLGVERDNRSNFKADYGGFSTNVKGVFAAGDCRRGQSLVVWAISEGRQAAARVDNYLIKEDEEYRNQDGLVKRQRGLNKKQQGGSKHTVMT 2195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01745 2195 Gene3D Aldolase class I 913 1351 IPR013785 -
Spst8g01745 2195 MobiDBLite consensus disorder prediction 1020 1040 - -
Spst8g01745 2195 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1349 1613 IPR036485 GO:0016491
Spst8g01745 2195 PRINTS Adrenodoxin reductase family signature 1848 1861 - -
Spst8g01745 2195 PRINTS Adrenodoxin reductase family signature 1891 1901 - -
Spst8g01745 2195 PRINTS Adrenodoxin reductase family signature 1825 1847 - -
Spst8g01745 2195 PRINTS Adrenodoxin reductase family signature 1969 1983 - -
Spst8g01745 2195 Gene3D - 1353 1624 IPR036485 GO:0016491
Spst8g01745 2195 CDD GltS_FMN 930 1309 IPR002932 GO:0006537|GO:0015930|GO:0016638
Spst8g01745 2195 SUPERFAMILY FAD/NAD(P)-binding domain 1821 2161 IPR036188 -
Spst8g01745 2195 Pfam Glutamine amidotransferases class-II 99 523 IPR017932 -
Spst8g01745 2195 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 99 500 IPR017932 -
Spst8g01745 2195 Pfam Conserved region in glutamate synthase 928 1297 IPR002932 GO:0006537|GO:0015930|GO:0016638
Spst8g01745 2195 Pfam Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1701 1811 IPR028261 -
Spst8g01745 2195 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 99 525 IPR029055 -
Spst8g01745 2195 MobiDBLite consensus disorder prediction 2173 2195 - -
Spst8g01745 2195 FunFam Glutamate synthase [NADH], amyloplastic 913 1336 - -
Spst8g01745 2195 Pfam Pyridine nucleotide-disulphide oxidoreductase 1824 2150 IPR023753 GO:0016491
Spst8g01745 2195 CDD gltB_C 1357 1606 IPR002489 GO:0016491
Spst8g01745 2195 Gene3D - 1934 2094 IPR036188 -
Spst8g01745 2195 Pfam GXGXG motif 1380 1566 IPR002489 GO:0016491
Spst8g01745 2195 CDD GltS 99 518 - -
Spst8g01745 2195 Gene3D - 1653 1822 IPR009051 GO:0051536
Spst8g01745 2195 SUPERFAMILY alpha-helical ferredoxin 1675 1834 - -
Spst8g01745 2195 SUPERFAMILY FMN-linked oxidoreductases 569 1331 - -
Spst8g01745 2195 Gene3D - 1823 1933 - -
Spst8g01745 2195 FunFam Glutamate synthase 1 [NADH] chloroplastic 1660 1823 - -
Spst8g01745 2195 PANTHER GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN 159 2181 - -
Spst8g01745 2195 FunFam Glutamate synthase [NADH], amyloplastic 1933 2094 - -
Spst8g01745 2195 PIRSF GOGAT 13 2187 IPR012220 GO:0005506|GO:0006537|GO:0010181|GO:0016040|GO:0050660
Spst8g01745 2195 FunFam Glutamate synthase 1 [NADH] 553 911 - -
Spst8g01745 2195 NCBIfam glutamate synthase small subunit 1679 2164 IPR006005 GO:0006537|GO:0016639
Spst8g01745 2195 FunFam Glutamate synthase [NADH], amyloplastic 1824 1932 - -
Spst8g01745 2195 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 99 535 IPR029055 -
Spst8g01745 2195 Pfam Glutamate synthase central domain 573 861 IPR006982 GO:0006807|GO:0015930
Spst8g01745 2195 Gene3D Aldolase class I 553 912 IPR013785 -
Spst8g01745 2195 FunFam Glutamate synthase 1 [NADH] chloroplastic 99 535 - -
Spst8g01745 2195 FunFam Glutamate synthase, large subunit 1353 1624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01745 Spst-Chr8 20916667 20928464 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01745 K00264 - gmx:100809905 4042.66