Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01722 ATGGAGAGTGATCACGTAAAACTGAAAGTCCACCTGGTTACTGGCACGGACTCGGGCGAGTTCAGGCTGTTGAGTGAGGCGTTGGCTCGTAGCTCAGTGGTGGGCCTGGACGCGGAGTGGAAGCCGGTGCGGAGGTCGTTCCCGACGGTGTCGGTGCTCCAAATCGCGTGCGGTGATTGGGGCGTGTTTGTATTGGACTTGTTGTCCCTTCCTCTCTCTTCCCTGTCGGAACAGCTGCGAGAATTGCTCCTGTGCCCCGACATCTTGAAACTCGGATTCGGATTCAAGCAGGATTTGGTTTACTTGTCCTCCACTTTCTGCTCCCACGGCGGCTTCGACAAGGTTGAGCCCTATTTGGATATCAGAAGCGTGTACAATCATCTGCAGCATAATAAGAAACATGTACCCAAACAAAGTAAGAGTTTGTCGAGTATATGTGCAGAAGTATTGGGGTTTTCGCTCTCCAAGAAACGTACTGCTGGAAGCTTGTTCGTCGATGTTGTTCTTTCTGTAGTTGTTTTGGAACTCCAATGTAGTGATTGGTCACACCGTCCTCTTACAGAAGGGCAGATAAGATATGCAGCTATGGATGCTCATTGCTTGCTCGACATATTTAAGATCTTCCAGGCAAAGGTTGTCAAAGGAGACTTTATTCTTGACACTACGGTATTGTCTAATCCTGATGCAAGTCTTGGGTTGAAAGAGCTATTCAGAAATCATGATATGTGTGATAAAGTCCTAAGAGCACATTCTTGTGAAGCTTTAGCAAATGTCCAAGCCACAACTTGTTCTGATGTTACTCGGATAATACCTTTAGCTGGGGGAATGATCCAAAAGTCACCATACTGGGTTACTATACCAATGGATGAAATTTTGTTGAAAATTGTGAAAAAATATGGTGATATGATCTTGCTAAAGGAGTCAGACAGAAAGCCCAAAAGCTCAAAAAAGAAGGGAAAGAAGCATTCACTAATTAATGGGATCAGCAAGGAAAATCATTTTGAGAAGTTTGATGAGTGGCAAGGTACCCCACCTTGGGATCCTTTGGAGGGGGGCAATGGATATCCAAAGTTCCTTTGTGATGTAATGGTTGAAGGCTTGGCAAAACATTTACGGTGTGTTGGGATAGATGCTGCAATTCCTTATTCAAAGAAGCCTGAACCAAGGATGTTGATAGAACAAGCACAAAAAGAGAAACGTGTGATTTTAACGAGGGATGCAAAGTTGCTAAGACATGATTATCTCACAAAATACCAAATATATAAAGTGAGGAGTCTTCTGAAAAATGAACAACTACTCGAGGTTATTGAAACATTTCAACTAAAAATTAATGAGGACAAGCTAATGTCGAGGTGCACAAAATGCAATGGAACATTTATTCAGAAGCCACTGACAACTGAAGAAGCTATTGAAGCGGCAAAGGGTTTTCAAAGAATTCCAAATTGCTTATTTGACAAGAATTTAGAGTTTTGGCAGTGCAACGACTGTCACCAACTTTATTGGGAGGGAACCCAATACCATAATGCAGTTCAGAAGTTTATTGACATTTGCAAGCTTAGTGACTAA 1566 0.4285 MESDHVKLKVHLVTGTDSGEFRLLSEALARSSVVGLDAEWKPVRRSFPTVSVLQIACGDWGVFVLDLLSLPLSSLSEQLRELLLCPDILKLGFGFKQDLVYLSSTFCSHGGFDKVEPYLDIRSVYNHLQHNKKHVPKQSKSLSSICAEVLGFSLSKKRTAGSLFVDVVLSVVVLELQCSDWSHRPLTEGQIRYAAMDAHCLLDIFKIFQAKVVKGDFILDTTVLSNPDASLGLKELFRNHDMCDKVLRAHSCEALANVQATTCSDVTRIIPLAGGMIQKSPYWVTIPMDEILLKIVKKYGDMILLKESDRKPKSSKKKGKKHSLINGISKENHFEKFDEWQGTPPWDPLEGGNGYPKFLCDVMVEGLAKHLRCVGIDAAIPYSKKPEPRMLIEQAQKEKRVILTRDAKLLRHDYLTKYQIYKVRSLLKNEQLLEVIETFQLKINEDKLMSRCTKCNGTFIQKPLTTEEAIEAAKGFQRIPNCLFDKNLEFWQCNDCHQLYWEGTQYHNAVQKFIDICKLSD 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01722 521 Gene3D - 3 216 IPR036397 GO:0003676
Spst8g01722 521 SMART 35exoneu6 12 213 IPR002562 GO:0003676|GO:0006139|GO:0008408
Spst8g01722 521 Pfam 3'-5' exonuclease 16 212 IPR002562 GO:0003676|GO:0006139|GO:0008408
Spst8g01722 521 Pfam Mut7-C RNAse domain 356 512 IPR002782 -
Spst8g01722 521 PANTHER 3'-5' EXONUCLEASE DOMAIN-CONTAINING PROTEIN 175 518 - -
Spst8g01722 521 SUPERFAMILY Ribonuclease H-like 9 215 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01722 K09122 - gmx:100782654 830.091