Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01718 ATGATCCCACAGTCCCCTGTTCAATGCAGCAGTGCCGGGTGCATTCTCCGCAACTCCTACGGTGCGTGGGGTGACCGCAGGGACTGTTCTGCGCTCAACGTGACATACCCGACAACAGAAGAAGAGCTCCGTTCGGCAGTGTCCTACGCTGTCCGCAACAACCTCAAAGCCAAGGTGGTCACGAGATTCTCCCACACCATTCCCAAGTTAGCATGTCCCCAAGGGAGCGGAAGAGCAAGCACAGGTGCCACTCTGCTCATCAGCACAGAGAAGTACGACTCTGGGATCGAAATCGATGCTGCGAGTATGACTGTGACTGCTGATGCGGGTGTGGGCCTCCGGCAATTGATCGACGCGGTTGAGAGTGGAGGGTTCAGCTTGGTGGCTGCGCCTTATTGGGAGGGTGTGACGGTTGCAGGGGTTATCAGCACGGGGGCGCATGGTAGCTCGTGGTGGGGGAAAGGTGGTTCTGTTCACGATCATGTTGTGGGGATTAATGTTGTTGTCCCTGCTTCCAAATCTGAAGGGTATGCGAAGGTTTTGAGATTGCGGGCACATGACCCAATGCTTGATGCGGCCAAACTCTCTCTCGGAGTCCTCGGTGCCATCTCCAAGGTAAAATTATCAGTGGAGTATAGGTTCAAAAGAAGCATAACTTACAATTTTACAGAAGAAGATGATGGTATCGAAGATGTATACGTAGAGCATGCAGAAAAGTACGAATTTGCAGATATAACTTGGTATCCATCAAGACACACAGTGGTGTACAGATACGATTCCAGGGTTCCCTTAAATGCCTCAGGTGATGGAGTTAATGACTTCATTGGATTTCAACCCAATTCCATCTTCATATCTGAATCGGTTAGAGCAGCAGAAAAATTGCTAGAAAGTACGAGAAACCCTAGTGGAAAATGCTTAACAGCAGCTACTACATTAGGCTTCAAGAAATTAGTAGGCAATGGGTTGAAGAACAATGGCAAAATCTTCAGTGGCTACCCAGTAGTGGGTTACCAAGGCAAAATGCAAACTTCAGGTTCATGCTTATACTCAACAAGATTAGACACATCATGTGCTTGGGATCCACGAATCAAAGGGCTATTCTTCTATGAGAGCACTGCTATCTTCCCTGCATCAACATTTGGTGACTTCCTTCGTGATGTGAGGAAACTGAGAGACCTAAATCTAGAAAATTTCTGTGGGGTGGACAACTACAACGGGTTGCTATTTCGCTTCATCAAAGCCTCAAGTGCATATCTAGGGCAACCTGAGGACTCTGTAGTGGTTGATTTCAACTATTATCGTGCAAACGACCCATCAATTCCTAGACTGAACCAAGATGTGTGGGAGGAAGTGGAGCAATTGGCATTCTTCAAGTATGGTGCTAAGCCACATTGGGCTAAGAATAGGAACATAGCATTCTTTGGGGTGCAACACAAGTATCCCAAGTTTAACATGTTCATTGCAGCAAAACAAAAAATGGATCCACAAAATGTGTTCTCTAGTGAATGGTCAGATGATATACTTTATGGGAAGGAATCAGAAAAGGTTGATGGCTGTGCCTTGGAGGGACTCTGCATATGTAGCGAAGACAGACATTGCAGCCCTCAAAAAGGGTTTTACTGCAGCCATGGCCTTGTCTACAAGGAAGCTAGAGTATGTAGATATTTACAACCATCCATGTAA 1683 0.467 MIPQSPVQCSSAGCILRNSYGAWGDRRDCSALNVTYPTTEEELRSAVSYAVRNNLKAKVVTRFSHTIPKLACPQGSGRASTGATLLISTEKYDSGIEIDAASMTVTADAGVGLRQLIDAVESGGFSLVAAPYWEGVTVAGVISTGAHGSSWWGKGGSVHDHVVGINVVVPASKSEGYAKVLRLRAHDPMLDAAKLSLGVLGAISKVKLSVEYRFKRSITYNFTEEDDGIEDVYVEHAEKYEFADITWYPSRHTVVYRYDSRVPLNASGDGVNDFIGFQPNSIFISESVRAAEKLLESTRNPSGKCLTAATTLGFKKLVGNGLKNNGKIFSGYPVVGYQGKMQTSGSCLYSTRLDTSCAWDPRIKGLFFYESTAIFPASTFGDFLRDVRKLRDLNLENFCGVDNYNGLLFRFIKASSAYLGQPEDSVVVDFNYYRANDPSIPRLNQDVWEEVEQLAFFKYGAKPHWAKNRNIAFFGVQHKYPKFNMFIAAKQKMDPQNVFSSEWSDDILYGKESEKVDGCALEGLCICSEDRHCSPQKGFYCSHGLVYKEARVCRYLQPSM 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01718 560 Pfam FAD binding domain 34 170 IPR006094 GO:0050660
Spst8g01718 560 Gene3D - 94 211 IPR016169 -
Spst8g01718 560 PANTHER GULONOLACTONE OXIDASE 9 535 - -
Spst8g01718 560 ProSiteProfiles PCMH-type FAD-binding domain profile. 27 213 IPR016166 GO:0071949
Spst8g01718 560 Gene3D - 370 470 - -
Spst8g01718 560 FunFam L-gulonolactone oxidase 5 94 212 - -
Spst8g01718 560 NCBIfam FAD-dependent oxidoreductase 3 554 IPR010030 -
Spst8g01718 560 Pfam D-arabinono-1,4-lactone oxidase 410 505 IPR007173 GO:0003885|GO:0016020
Spst8g01718 560 SUPERFAMILY FAD-binding/transporter-associated domain-like 18 210 IPR036318 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01718 Spst-Chr8 20472673 20478850 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01718 K00103 - gmx:100778616 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01718 8 20472673 20478850 Spst8g01718 8 20472673 20478850 ECH