Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01666 ATGCAACCCCAGCTGAGCTCAAGAATCAATTTGGTCCAATTAAAAGCGCAGATTGTGAAGAGGATTGGGGCAGAGAAGTCGAAGCAGTACTTTTATTACTTGAACAGGTTTCTGAGTCAGAAGCTGAGCAAGACTGAATTTGATAGGTCATGTTATCGGGTACTTGGCAGAGAGAATCTTCCGTTACACAATCACTTTATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGACCCCACCGCCAGTCCAGCAAGTGACAGATCCTCATTCAAAATCAGGAACACTTGTCAATCATGCATCTCCTGGTAGAGAGGATGGGCACGAACAGAGTGTTGCTAACTTCCAAAATCAGAATGCTTCCATTTGGTCCAATGGGGTTTTACCGATTTCGCCACGTAAATTAAGGTCTGGAGTGCGTGATAGAAGGCTTAAAGATAGGCCGAGCCCTCTTGGACCAAATGGAAAAGTTGATTCTGTTGCTCACCAATCCACAGCTACAGAAGACAGCGGTAGTAAGGTTGATATGGAGAATGGAATTCTTACTCCATGCGATTATCAAAGACCAACGCAGCATCTTCAGGCAGTCGATGAGCTACCTGAGAATGGGATCGGGGATGCTATTCGGAGACCTTCCCAGAAACCAAGAATACATGGCAAAGGACCAAGAGATGTTTCAATTGTTGAAGATGGAGAAGAGGTGGAGCAGTTAAACCGCCTCAATTTCTCTAGAAGTCCCTTGGTAGCACCACTTGGGATTCCCTACGGCATCACCAGTGTTAGTGTGGCCCGGAAAACATTGCCAGTGAATAGCACTAGTAATGTTGCTAGTTGTTGTGACAGTGGTAGGTTATCTGATACAGATTCTTTGAGAAGGCGCATGGAGCAGATTGCCACAGTACAGGGTCTTGGGAGTGTTTCTGTGGAATGTGCAAATACGTTGAATAGTATGTTAGATGTTTACTTGAAAAGGATGATCAGATCTTGTGTTGATTTAGGGGGAGGTAGGTCCGCAAATGAGCAGAGCAAGCTCCCTGTCTCGAAACAGCAGATTCAGGGGAAGGTCATCAACGGTTTCTGGCCAAATAACCATTTACAGGTGCAGAGTGCCAGTGGGTTGGTGGAACCTGAGCTTGGATGCAGACCACCGCACCCGGTATCTTTACATGATTTTAAAGTTGCTATGGAGCTAAATCCACAGCTACTTGGAAAAGATTGGCCAGTACAATTGGAGAAAATTTCTATGCAATCATTTGAGGAATAA 1263 0.4497 MQPQLSSRINLVQLKAQIVKRIGAEKSKQYFYYLNRFLSQKLSKTEFDRSCYRVLGRENLPLHNHFIKSILKNACQAKTPPPVQQVTDPHSKSGTLVNHASPGREDGHEQSVANFQNQNASIWSNGVLPISPRKLRSGVRDRRLKDRPSPLGPNGKVDSVAHQSTATEDSGSKVDMENGILTPCDYQRPTQHLQAVDELPENGIGDAIRRPSQKPRIHGKGPRDVSIVEDGEEVEQLNRLNFSRSPLVAPLGIPYGITSVSVARKTLPVNSTSNVASCCDSGRLSDTDSLRRRMEQIATVQGLGSVSVECANTLNSMLDVYLKRMIRSCVDLGGGRSANEQSKLPVSKQQIQGKVINGFWPNNHLQVQSASGLVEPELGCRPPHPVSLHDFKVAMELNPQLLGKDWPVQLEKISMQSFEE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01666 420 MobiDBLite consensus disorder prediction 158 172 - -
Spst8g01666 420 MobiDBLite consensus disorder prediction 134 175 - -
Spst8g01666 420 MobiDBLite consensus disorder prediction 79 98 - -
Spst8g01666 420 MobiDBLite consensus disorder prediction 79 109 - -
Spst8g01666 420 PANTHER TRANSCRIPTIONAL ADAPTER 1 3 419 IPR024738 GO:0070461
Spst8g01666 420 MobiDBLite consensus disorder prediction 203 223 - -
Spst8g01666 420 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 6 332 IPR024738 GO:0070461
Spst8g01666 420 MobiDBLite consensus disorder prediction 135 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01666 Spst-Chr8 19438330 19439592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01666 - - gmx:100811524 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01666 8 19438330 19439592 Spst8g01666 8 19438330 19439592 ECH
Spst8g01666 8 19438330 19439592 Spst9g00876 9 7684632 7685891 PCT