Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01654 ATGAGTTTCAAAAGCTCTTCTCTTCTGTGCATAGCACTTTTCCTTGCATGGTCTTCTGCTATTTCTGGCTTTAACATCAATGAACTGCTACAAAAAGAAGCAGATCTTTCCACATTCAATAAGTACATCACCGAAGCCAAGCTTGCAGATGAAATAAACAGCCGGAACACCATCACTGTCCTGGCTGTTAATAACGAGGCTATCGCTTCCATTGCTGGCAAGTCCCCAGAATTCATCAAGGCCGTGATTAGCACCCATGTCATCCTTGACTTTTTTGATGAGAAGAAGCTAATGGAAGCCCAGGCTACCAGCCAAAAACTGACTACCCTCTACCAGGCCTCAGGTCTTGCCTTGAAGGAACAAGGTTTCATCAGTGTTCAACTCATCGGTGAGGGCGCAATCGCCTTCAACTCCGTCGGATCTTCCGAGAACTCCGAGCTCGTCAGAACCGTCCTCTCTCAGCCCTACAACATCTCCATTCTCCAAGTCACCAAGCCCATCATACCCCTAGGCCTTGATTCTCAAACCCCAACTGCACAATCTCCTCAAGGATCTCAATCCTCCCCACAAACCGCCAAGGCCCCATCTGCCACAGACACTGCTCAGTCACCAGCCACCACAAAGACTGCTGATGCACCAGCTCCTGCACAGAGTGCCCAGGCACCAGCCACCACAAAGACTTCTGATGCACCAGCTCCTGCACAGAGTGCCCAGGCACCAGCTACCACAACCACTACTGATGCACCGGCTCCTACACAGACTGCCAAGGCACCAGCTTCCACAAAGACCGGTGATGCACCAGCTCCGGCAGAGAATGCCAAGGCACCAGCTTCCGCAAAGACTGGTGATGCACCAGCTCCGGCACAGAGTGCCAAGGCACCAGCTCCCGCAAAGACTGCTGACGCACCAGCTCCCGCAAAGACTGCTGACGCACCAGCTCCAGCAAAGACTGCTGACGCACCTGCTCCCACAAAGACTACTGACGCACCAACTCCTTCGGCTGCGTCTCCACCTGCCACTGCCACGTCTCCAGTGGCTGCCGATGCCCCAGCAGCTGCCGACGGTCCCGCGGCTGACGGTCCCGCCGCTGACGGTGGTGCAGCTAGCAGCTCTTCAACCATTAAGATGGGTTTGTTTGGAGCAGTGATGGCCTTCGCTTCTCTCTTCATCGTCCTCTAA 1179 0.542 MSFKSSSLLCIALFLAWSSAISGFNINELLQKEADLSTFNKYITEAKLADEINSRNTITVLAVNNEAIASIAGKSPEFIKAVISTHVILDFFDEKKLMEAQATSQKLTTLYQASGLALKEQGFISVQLIGEGAIAFNSVGSSENSELVRTVLSQPYNISILQVTKPIIPLGLDSQTPTAQSPQGSQSSPQTAKAPSATDTAQSPATTKTADAPAPAQSAQAPATTKTSDAPAPAQSAQAPATTTTTDAPAPTQTAKAPASTKTGDAPAPAENAKAPASAKTGDAPAPAQSAKAPAPAKTADAPAPAKTADAPAPAKTADAPAPTKTTDAPTPSAASPPATATSPVAADAPAAADGPAADGPAADGGAASSSSTIKMGLFGAVMAFASLFIVL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01654 392 Gene3D FAS1 domain 24 169 IPR036378 -
Spst8g01654 392 ProSiteProfiles FAS1/BIgH3 domain profile. 23 152 IPR000782 -
Spst8g01654 392 FunFam Fasciclin-like arabinogalactan protein 3 23 167 - -
Spst8g01654 392 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 379 IPR033254 -
Spst8g01654 392 SUPERFAMILY FAS1 domain 30 169 IPR036378 -
Spst8g01654 392 MobiDBLite consensus disorder prediction 172 370 - -
Spst8g01654 392 Pfam Fasciclin domain 35 121 IPR000782 -
Spst8g01654 392 MobiDBLite consensus disorder prediction 172 260 - -
Spst8g01654 392 MobiDBLite consensus disorder prediction 324 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01654 Spst-Chr8 19292692 19293870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01654 - - vun:114195537 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01654 8 19292692 19293870 Spst8g01654 8 19292692 19293870 ECH