Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01646 ATGAAGAAGGAACGTGCATGGCCGCAATTTATAAGGAATCTTTTGATCATGGTTGGATCAAGAAGCCGGCCACAGTTGAGGAGGCCTACATGGATTATTGTTCTGGTTTCCATCGTGTGTGTGTTTCTCATTGCTGCCTACGTGTATCCGCCGCGGAGCCCCTCCTCCTGCTCCCTCTTCTCCTCCAGTGGTTGTGGTGGCAATTCTTTCGATCTACCACCTGCGGCTCGATCACGCGAATTGACTGATGCGGAGGTTGAGTCTCGTGTTGTTATTAGCGAGATTCTCAACTATTATCCAGTGATAACCAAGAAACCTAAAGTCGCTTTTTTGTTTTTGACTCCGGGTTCCTTGCCTTTCGAGAAGCTCTGGCACATGTTCTTTCAGGGCCATGAGGGAAAATTCACTATTTATGTACATGCATCAAAGGATAAGCCAATACATGTTAGCCCCTATTTTGTTGGCCGAGACATTCACAGTGAACCGGTAGGCTGGGGAAAAATTTCTATGGTTGAGGCAGAAAGGAGACTTTTGGCAAATGCACTTTTGGACCCTGATAACCAACACTTTGTCTTGTTGTCTGAAAGTTGTATACCAGTGCGTCGCTTTGATTTTGTGTACAACTACTTATTATTAACAAATGTCAGCTTTATTGACAGCTATGTGGATCCTGGTCCTCATGGAAATGGCAGGTATATACAATATATGTTGCCTGAAGTAGAAAAGAAGGATTTCCGAAAGGGTTCACAGTGGTTCTCAATGAAACGGCAGCACGCAATAATAATTATGGCAGACAGTCTCTATTTTACAAAATTCAAGCATCATTGCAGGCCAAATATGGAGGGAAACCGCAACTGTTATGCTGATGAGCATTACCTGCCAACGTTCTTTAATATGCTTGATCCTGGTGGAATCGCAAATTGGTCAGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCGAGGTCATTCAGAGCTCGGGATATTACTTATCAAGTCATGAAAAACATAGCATACATTGACGAAAGTCCACATTTTACAAGTGATGCAAAGAGAACGGTGGTGGTTACACCTTGCGTGTTGAACGGCGCAAAACGATCATGTTATCTATTTGCCCGGAAGTTTTTCCCAGAAACTCAGGAAAGATTAATCCAACTCTACTCTAATTCTACAATATTCTAA 1185 0.4287 MKKERAWPQFIRNLLIMVGSRSRPQLRRPTWIIVLVSIVCVFLIAAYVYPPRSPSSCSLFSSSGCGGNSFDLPPAARSRELTDAEVESRVVISEILNYYPVITKKPKVAFLFLTPGSLPFEKLWHMFFQGHEGKFTIYVHASKDKPIHVSPYFVGRDIHSEPVGWGKISMVEAERRLLANALLDPDNQHFVLLSESCIPVRRFDFVYNYLLLTNVSFIDSYVDPGPHGNGRYIQYMLPEVEKKDFRKGSQWFSMKRQHAIIIMADSLYFTKFKHHCRPNMEGNRNCYADEHYLPTFFNMLDPGGIANWSVTYVDWSEGKWHPRSFRARDITYQVMKNIAYIDESPHFTSDAKRTVVVTPCVLNGAKRSCYLFARKFFPETQERLIQLYSNSTIF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01646 394 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 40 386 IPR044174 GO:0016757
Spst8g01646 394 Pfam Core-2/I-Branching enzyme 108 338 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01646 Spst-Chr8 19189065 19195473 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01646 - - gmx:100788165 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01646 8 19189065 19195473 Spst8g01646 8 19189065 19195473 ECH