Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Spst8g01640 | ATGGCCATGGATGAACAACAATCATCAGAGCTATTGACATCAGAAAATGGAAGAGAATTGTCAGAGAACTACAGAGAAGAAGGGAGAGAAAAGGGTCCTCATCGTCACCCTCAATCAGGAACCATCTCTTTCCCCGGTGGTGGCTTCATTGGGAAACATAGGTTGCAAGCAGCCCTGACCCACCTCAATAACCAAATCACCATTTTGCAGGAAGAATTGGAAAAAGTTGAAACAATTGGTGAATCCTCCACCGTTTGCAAGGATTTAATTTCAAGCGTTGAATCCACTCCAGATCCTCTCCTTCCATGCACCAAAGGTTCAGTGGATGCTGCTTGGGATCGATGGTTCGGAGCCACCCACCATTCTCGAACACACAAACGTTGGATTTAG | 390 | 0.459 | MAMDEQQSSELLTSENGRELSENYREEGREKGPHRHPQSGTISFPGGGFIGKHRLQAALTHLNNQITILQEELEKVETIGESSTVCKDLISSVESTPDPLLPCTKGSVDAAWDRWFGATHHSRTHKRWI | 129 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Spst8g01640 | 129 | Coils | Coil | 52 | 79 | - | - | |
| Spst8g01640 | 129 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Spst8g01640 | 129 | SMART | G_gamma_2 | 55 | 129 | - | - | |
| Spst8g01640 | 129 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - | |
| Spst8g01640 | 129 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
| Spst8g01640 | 129 | PANTHER | GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1 | 36 | 129 | IPR045878 | - | |
| Spst8g01640 | 129 | Pfam | GGL domain | 61 | 116 | IPR015898 | GO:0007186 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Spst8g01640 | Spst-Chr8 | 19083186 | 19084267 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Spst8g01640 | K24772 | - | gmx:100798973 | 201.445 |