Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01639 ATGGCGATGCTTTCCAAGATATCGTCCTCATTCTGTCTCACACTCTCCCTCAAACCCAAACTCGTCCATCGCACCAAAGCCTTTCTGCTTTCTCGTTCAACCGCCACCACCTCAGAGAAGAAGAAGGAGAACGCAAAGGCAGGGTTGGCCAAGGAGAAGCGCAGAACCCGTTCCGACAAACACTTCGACCGACACCAAATAATTGAGCATTGCAACGTAAACGACTCCCACACCGACTCCAAGTTCTCTCACATTCCGGTGATGCTGGGCGAAGTCATGGACGTGTTCTCCGCCGCATCCTTAACCTCCTTCGTCGATTGCACCCTCGGCGCAGCCGGTCACTCCATCGCCGTGATTAGGGGTCATCCTGAAATGAAGTTTTATGTGGGGATGGATGTGGACTCTGTCGCACATCACATTGCCCAGCCACGCCTTGATGCAGTTTTAGGTGGTGATGTCAAAGCGTATACCGTTTTGAGGAACTTTAGAGATGTCAAGTCTGTGCTTAGAGAATTTGCTGACTTACACATGGGGGTTGATGGCATCTTAATGGACTTGGGAATGTCGTCTATGCAGGTAGACGATCCTGCAAGAGGATTCAGTGTGCTTGGTGATGGACCCCTTGATATGCGAATGGATCCTCAGGCAAGTCTTAAAGCAGAGGACATATTAAATTCATGGCCAGATTCTGAAGTGGGCCGAATCCTAAGAGAATATGGAGAAGAAAGTAATTGGCGAACCCTCCAAAAGAAAATTGTCAATGCCCGATTACATGGTGGATTTCATTCGACCACTGATTTGCTAGATCTTATTAAACGTGTGACTCCTCCAATGAAAGGTGGAAGACAAGGTTGGATAAAGACCGCAACCCGTGTTTTTCAAGCTCTGAGAATTGCCGTTAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTTTCTCCCAGGGGTAGACTTGCTGTCATATCTTTTCATAGTCTAGAGGACAGAATTGTGAAGCAGTCATTTCTGAATATAATTAAAGGGGTCGAAGATCTGGAAGAAAGGGAGAGCCTCAACAGTGGTTTGAGGAAGACTAGTGATGAAATCCAAGAAAAAGAAGCATGGATAAAGCAAGTAATACATGGTCCAAATGGAACAATTCTCACAAAAAGACCAATCACACCATCAGGAGAAGAAGAAAAATTGAACCGCCGTAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA 1251 0.4604 MAMLSKISSSFCLTLSLKPKLVHRTKAFLLSRSTATTSEKKKENAKAGLAKEKRRTRSDKHFDRHQIIEHCNVNDSHTDSKFSHIPVMLGEVMDVFSAASLTSFVDCTLGAAGHSIAVIRGHPEMKFYVGMDVDSVAHHIAQPRLDAVLGGDVKAYTVLRNFRDVKSVLREFADLHMGVDGILMDLGMSSMQVDDPARGFSVLGDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGFHSTTDLLDLIKRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLSPRGRLAVISFHSLEDRIVKQSFLNIIKGVEDLEERESLNSGLRKTSDEIQEKEAWIKQVIHGPNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01639 416 MobiDBLite consensus disorder prediction 39 60 - -
Spst8g01639 416 SUPERFAMILY Putative methyltransferase TM0872, insert domain 198 301 IPR023397 GO:0008168
Spst8g01639 416 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 79 415 IPR002903 GO:0008168
Spst8g01639 416 Gene3D Putative methyltransferase TM0872, insert domain 196 303 IPR023397 GO:0008168
Spst8g01639 416 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 415 IPR029063 -
Spst8g01639 416 MobiDBLite consensus disorder prediction 386 416 - -
Spst8g01639 416 Pfam MraW methylase family 82 415 IPR002903 GO:0008168
Spst8g01639 416 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 81 415 IPR002903 GO:0008168
Spst8g01639 416 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 84 416 IPR002903 GO:0008168
Spst8g01639 416 Gene3D Vaccinia Virus protein VP39 84 413 IPR029063 -
Spst8g01639 416 FunFam Ribosomal RNA small subunit methyltransferase H 196 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01639 K03438 - gmx:100803819 689.878