Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01605 ATGCTCAAGCAAATCCTCAGCAAGCTTCCTCGGAAGTCGTTCAAATCCGACACGGACGAGTCAACTCGGGGTGACTCGGCGCGTTCCTCCGATTCGCCACGCCCCGTGGGCAAAAGCCAGAGACCACATGGCGGTAGTTCATCCGCCGCGAAGCGAGCTTCGTCATCGGCGGTGTTTCCGGCGAGCATGGTGTCCGGATTTGAACCTTTGGTGCCGTTTAAGGATGTTCCTAACGCTGAGAAGATGAACCTGTTTGTGAGCAAGTTGAGCCTTTGTTGCGTCACATTTGATTTCAGTGACCCTAGTAAGAGCATTGCAGATAAGGACGTGAAAAGGAAGACTTTGGTCGAGCTTGTCGATTTTGTGGCTTGTGGGACAATGAGGTTTAGTGAACCTGCTATCCTTGCTTTGTGTAGAATGTGTGCTTTCAATTTGTTTAGAGTCTTCCCTCCTAATTATAGGACAAGTGGTGGTGGTGAGAATGATGATGATGAGCCTATGTTTGATCCTGCTTGGCCACATTTGCAACTTGTGTATGAATTGCTGCTTAAGTTTATCTCTTCTTCGTGCCTCGATGCAAAGGTGGCGAAAAAGTATATTGATCATTCGTTTATTGCCAGATTACTCGAGTTGTTTGATTCGGAGGACCCTAGGGAAAGGGATTGCCTGAAGGCGATTCTGCATAGGATTTATGGGAAGTTCATGGTGCATAGACCCTATATTCGGAAAACAATTAACAATATATTTTACCGATTCGTGTTTGAGACAGAGAAGCACAGTGGGATTGGTGAGTTGTTGGAGATTTTTGGGAGTGTTATTTCTGGGTTTGCTTTACCCTTGAAAGAGGAACACAAAATCTTCTTGTGGAGGGTTTTGGTTCCCTTGCACAAGCCGAAATCAATCGGGGTCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTTATAGAGAAGGAGCCCAAGTTAGCTAGCATTGTGATAAGGGGTTTGTTAAAATATTGGCCAGCAACAAATAGTCAGAAGGAGGTCATGTTTCTGGGTGAACTGGAAGAAATTTTGGAAGTAATTAACATGGTAGAGTTCCAGAGGATCATGGTTCCTTTGTTTTGGCGGATTGGATGCTGCATAAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAACAATGACCACATTGTCAACTTGATTGCACATAACCGGTCAGTGATCCTGCCCATCATATTTCCAGCTTTAGATAGGAATGTTCAAAGCCATTGGAACCCGGCAGTTGTCAACCTAACTCACAATATGAGAAAAATGTTCTTGGAGATGGATGAGAAGCTCTTCATTTCTTGTTATAATCACTTTAAGGAGGAAGAAGCAATCTTGATCTCTGCAGCAGAGAAGCGAGAGGAAGCATGGAAACAACTAGAGCATGCAGCCAGTCTCAGGCCTGTTATTGGAAATACTGCAGTGTTAGTGTCCTGA 1479 0.4462 MLKQILSKLPRKSFKSDTDESTRGDSARSSDSPRPVGKSQRPHGGSSSAAKRASSSAVFPASMVSGFEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFSDPSKSIADKDVKRKTLVELVDFVACGTMRFSEPAILALCRMCAFNLFRVFPPNYRTSGGGENDDDEPMFDPAWPHLQLVYELLLKFISSSCLDAKVAKKYIDHSFIARLLELFDSEDPRERDCLKAILHRIYGKFMVHRPYIRKTINNIFYRFVFETEKHSGIGELLEIFGSVISGFALPLKEEHKIFLWRVLVPLHKPKSIGVYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVMFLGELEEILEVINMVEFQRIMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRSVILPIIFPALDRNVQSHWNPAVVNLTHNMRKMFLEMDEKLFISCYNHFKEEEAILISAAEKREEAWKQLEHAASLRPVIGNTAVLVS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01605 492 MobiDBLite consensus disorder prediction 28 51 - -
Spst8g01605 492 MobiDBLite consensus disorder prediction 10 27 - -
Spst8g01605 492 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 72 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst8g01605 492 PIRSF PP2A_B56 4 489 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst8g01605 492 SUPERFAMILY ARM repeat 83 474 IPR016024 -
Spst8g01605 492 Gene3D - 77 477 IPR011989 -
Spst8g01605 492 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 479 IPR002554 GO:0000159|GO:0007165|GO:0019888
Spst8g01605 492 MobiDBLite consensus disorder prediction 1 51 - -
Spst8g01605 492 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 77 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01605 Spst-Chr8 18499596 18502041 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01605 K11584 - gmx:100781390 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01605 8 18499596 18502041 Spst9g00835 9 7285034 7287041 PCT