Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01598 ATGGGTTGCGAGAGTTTGATGATTCCATGTCTGAAATTATCGGGATTGGAAGAGGGGAGTGAGGAATGGAGAGAGATGAGCAAGAAAGTGAGGGATGGTTGTGAGAGCCATGGCTGCTTCGTGATGGTTTATGATAATAAGGTTCCAAAGGGTTTACGTGAAGACATGTTTGCATGCATAAAAGAGTTGTTTGATTTACCAGAAGAAACGAAGAGGAAGGAGACAAGCAAAAAGCCTTACAGAGGCTACAATTGTGGCTGCCCAGTTATTCCTCTTTCTCAAAGCTTTGGAATTGATGATGCTCCTCTCCCCCAAACTGCTCTTGCCTTCACCAACCTCATGTGGCCTCAGGGAAACCCCCATTTCTGTGAGACATTGAACTCCACCAGCTCCAAGTTGCTTGATCTGAGTTTGGTGATTATGAAGATGCTCGTAGAGGCTTATGGGCTTCCGAAAGAGTACACCTCGGACATTGAAGAGTTGAAGAGTTCGAGTAATTTTCGGTTGATGAAGTACAAAGTGCCTGAAAGTGGTGAAGTGTGTGAGACTGCGTTGTTGCCTCACACAGACAAAAGTGCCCTAACGATTCTGTGCGAAAACCAGGTGGAGGGTCTGGAGGTGTTGAGCAAATCACAGGAATGGGTTCCGGTGAAGATACCGGAGGAGGGGTTTGTGGTGATCATGGGTGACGTGTTGAAGGCATGGAGCAATGGGAGAGTCCACGCTGCTACACACAGAGTTATGATGAAAGAAGAAAAAGAGAGATACTCGTTTGCACTATTTGCTGTGCCAAAAGAGGAGGTGAAGATTGAGGTGCCTCCAGAGCTGGTGGAAGAGAAGATTCACCCTCTTCGTTACAGGGCCTTCAACTATGGAGATTACTTCGCCTACTTCGTTTCTACCCTCCACGACAATGCATTGGATCTCTTTGCTGGCCTTGCATGA 945 0.4688 MGCESLMIPCLKLSGLEEGSEEWREMSKKVRDGCESHGCFVMVYDNKVPKGLREDMFACIKELFDLPEETKRKETSKKPYRGYNCGCPVIPLSQSFGIDDAPLPQTALAFTNLMWPQGNPHFCETLNSTSSKLLDLSLVIMKMLVEAYGLPKEYTSDIEELKSSSNFRLMKYKVPESGEVCETALLPHTDKSALTILCENQVEGLEVLSKSQEWVPVKIPEEGFVVIMGDVLKAWSNGRVHAATHRVMMKEEKERYSFALFAVPKEEVKIEVPPELVEEKIHPLRYRAFNYGDYFAYFVSTLHDNALDLFAGLA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01598 314 Pfam 2OG-Fe(II) oxygenase superfamily 180 262 IPR044861 -
Spst8g01598 314 FunFam 2-oxoglutarate-dependent dioxygenase DAO 6 311 - -
Spst8g01598 314 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 162 264 IPR005123 -
Spst8g01598 314 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 84 IPR026992 -
Spst8g01598 314 Gene3D - 7 310 IPR027443 -
Spst8g01598 314 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 294 - -
Spst8g01598 314 SUPERFAMILY Clavaminate synthase-like 5 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01598 Spst-Chr8 18381497 18382708 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g01598 6 294 Glycosyltransferase AT5G59530 24.342 2.17e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01598 - - gmx:100817159 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01598 8 18381497 18382708 Spst8g01598 8 18381497 18382708 ECH
Spst8g01598 8 18381497 18382708 Spst9g00826 9 7197748 7198934 PCT