Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01594 ATGGGTTCTTGCAAACCCCAACAGGAACATGTTCATGGGCCTATCATCATAGGTGCCGGGCCTTCGGGCCTAGCCGTGGCTGCGTGTCTCTCAGAGCACAAAGTCCCTTTCGTGATTCTTGAGAGAAGCAATTGCATAGTTTCTCTTTGGCAAGACAAAACCTACAACCGTCTCAAACTCCACCTCCCAAAGCAGTTTTGTGAGCTTCCCTTGAAGGGTTTTCCCCACACTTTCCCCAAGTACCCCACCAAGTACCAGTTTATATCCTACATGGAGTCCTATGCCTCACACTTCAACATCCACCCCAGGTTCAACCAAACTGTGGAGAGTGCTGAGTTTGATAAAGGCTCACAGCTTTGGGTGGTTAGGACTCAGGAGTGTGAGCTTGTGTCTCGCTGGCTTGTGGTGGCCACTGGTGAGAATGCTGAGCCTGTGGTTCCTAGAATTCATGGGATGGAGCACTTTTCTGGCTCCATTGCTCACACTAGTGTCTACAAGTCTGGCTCTGAGTACAGAAACCAGAAGGTTTTGGTCATTGGGTGTGGCAATTCAGGAATGGAAGTTAGCTTGGACCTTTGTAGATACAATGCCTCACCTTACATGGTTGCAAGGAATACAGTGCATGTTCTTCCTAGAGAGATGTTTGGCTTCTCAACTTTTGGCATAGCCATGGCACTCTTCAAGTGGTTTCCGATCAAGATAGTAGACAAAATCCTCTTGCTTGTGACCAACTTCATGTTGGGAAACACCAATCACTATGGCATCAAAAGGCCCAAAACAGGCCCAATAGAGCTGAAACTAGCCACAGGGAGAACCCCAGTCCTTGATGTGGGTCAAGTGGCACAAATCAAATGTGGGAACATAAAGGTGATGGAGGGTGTGAAGGAGATAACAAGAAATGGAGCCAAATTTATGGATGGACAAGAAAAGGAATTCGATGCTATAATCTTGGCAACAGGGTACAAGAGCAACGTGCCTACTTGGCTCAAGGGGTGTGATTTTTTCACGGAGGATGGAATGCCGAAAACGCCCTTTCCCCATGGATGGAAAGGGGAGCAGGGATTGTATACGGTGGGGTTCACGAGAAGAGGTATTCAAGGAACGTCCTGTGATGCAATCAAGATCGCTGAAGACATAGCCGCACAGTGGAGAACCGCAGAGAACAAGAAGCAATGCAATTCCCATATCATCCTTCTCACTTCATAG 1206 0.4776 MGSCKPQQEHVHGPIIIGAGPSGLAVAACLSEHKVPFVILERSNCIVSLWQDKTYNRLKLHLPKQFCELPLKGFPHTFPKYPTKYQFISYMESYASHFNIHPRFNQTVESAEFDKGSQLWVVRTQECELVSRWLVVATGENAEPVVPRIHGMEHFSGSIAHTSVYKSGSEYRNQKVLVIGCGNSGMEVSLDLCRYNASPYMVARNTVHVLPREMFGFSTFGIAMALFKWFPIKIVDKILLLVTNFMLGNTNHYGIKRPKTGPIELKLATGRTPVLDVGQVAQIKCGNIKVMEGVKEITRNGAKFMDGQEKEFDAIILATGYKSNVPTWLKGCDFFTEDGMPKTPFPHGWKGEQGLYTVGFTRRGIQGTSCDAIKIAEDIAAQWRTAENKKQCNSHIILLTS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01594 401 Pfam Pyridine nucleotide-disulphide oxidoreductase 15 206 - -
Spst8g01594 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
Spst8g01594 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 13 35 - -
Spst8g01594 401 PRINTS Pyridine nucleotide disulphide reductase class-II signature 132 140 - -
Spst8g01594 401 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Spst8g01594 401 FunFam Flavin-containing monooxygenase 14 388 - -
Spst8g01594 401 SUPERFAMILY FAD/NAD(P)-binding domain 174 384 IPR036188 -
Spst8g01594 401 SUPERFAMILY FAD/NAD(P)-binding domain 15 208 IPR036188 -
Spst8g01594 401 Gene3D - 14 389 IPR036188 -
Spst8g01594 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Spst8g01594 401 PRINTS FAD-dependent pyridine nucleotide reductase signature 14 33 - -
Spst8g01594 401 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01594 Spst-Chr8 18317830 18320216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01594 K11816 - gmx:100798781 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g01594 8 18317830 18320216 Spst9g00824 9 7166450 7168603 PCT