Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g01578 ATGGACATAAATGTAAATATGGACCCAAATGTAAATATGGGGCCCAATATCACTGTACAGAGATATGTTTCATCTGTGAGTGATATTAATTTGATACTTGAAGAAGAGAGTGGCATAGGAAATATGGTTGGTGAAGGAGAAAAACCAAAGGCAGTGATAGTGGGAGGTAGCATAGCAGGTCTATCAACTGCACGTGCTCTTACCTTAGCTGGTTGGGATGTTCTTGTGCTTGAGAAAACTATTTTATCTCCGACTGGAAGCCCCACTGGTGCTGGTCTGGGACACAACTCTTTGTCCCAACAAAACATTCACTCATGGCTTACACAATCACAACAACTCCTAAACAACACCACTTTACCTCTAACCATTGATCAGAACCATGCAACTGATAGTGAGAAGAAGGTTAACAACACATTGACAAGAGATGAGAGTTTAAACTTCAGAGCAGCACATTGGGCAGATCTTCATGGCCTTCTGTACAATTCACTGCCATCAGATATATTTTTATGGGGTCACCTTTCTTTCTCTTTCCATGCTGTGGATGATAAGGGTTCTGTCATGGTAAATGCTAAGGTTCTAGAAACTGGCAAGCATATGGCTGTCTCTCTTCCATTTGCCAGAAATATCTCCCTGATTTTAAACTCAGATCCTTTAGCGAGATCTGGTATCTTCTACAGATATTCAGGCTATTGTGCATGGAGAGGGGTTCTTGATTATTCAAAAAATGAGAATTCAGAGACCATCACTGGTATCAGAAAGACATACCCTGATCTAGGAAAATGCTTGTACTTTGACTTGGCGTCAGGCACACACACTGTGCTGTATGAGTTGCAAAACAAAAAACTCAATTGGGTTTGGTACGTGAGTCAGCCAGAGCCTGAAGTTAAGCTTTCTACTTTTCGGGGGACATCAGTGACAACGAAAGTAAATAGTGACATGATCCAGAAGATGCAGCAAGAGGCAGAGAAAAATTTCATTCCTGAGTTGGTAAAGGTCATAAAAGAAACAAGGGAACCTTTCTTAAATTTCATATATGATAGTGATCCCTTGGAGAATATATTTTGGGACAATGTGGTATTGGTAGGGGACGCCGCTCACCCCACCACTCCTCACTGTCTTAGAAGCACAAACATGTCCATATTAGATGCAGCAGTGTTAGGCAAATGCATGGAGAAGTGGGGAGCAGAAAATCTTGAATCAGCTTTAGAAGAGTATCAGTTCATTAGGCTACCAGTCACCTCCAAGCAAGTTTTGCATGCAAGGCGTCTAGGTCGCTTGAAACAAGGGCTGGTTCTACCTGATAGAGAACCTTTTGACCCAAAGTTAGTTAGGCCAGAGGACTATCAGGAGCTTCTACTGGGGAACACACCATTCTTTAATGATGTGCCTGAGTTACTTGGTTTAATACCATCTTCCAGTTCCCCATCTGATTGCTTGTAG 1440 0.4201 MDINVNMDPNVNMGPNITVQRYVSSVSDINLILEEESGIGNMVGEGEKPKAVIVGGSIAGLSTARALTLAGWDVLVLEKTILSPTGSPTGAGLGHNSLSQQNIHSWLTQSQQLLNNTTLPLTIDQNHATDSEKKVNNTLTRDESLNFRAAHWADLHGLLYNSLPSDIFLWGHLSFSFHAVDDKGSVMVNAKVLETGKHMAVSLPFARNISLILNSDPLARSGIFYRYSGYCAWRGVLDYSKNENSETITGIRKTYPDLGKCLYFDLASGTHTVLYELQNKKLNWVWYVSQPEPEVKLSTFRGTSVTTKVNSDMIQKMQQEAEKNFIPELVKVIKETREPFLNFIYDSDPLENIFWDNVVLVGDAAHPTTPHCLRSTNMSILDAAVLGKCMEKWGAENLESALEEYQFIRLPVTSKQVLHARRLGRLKQGLVLPDREPFDPKLVRPEDYQELLLGNTPFFNDVPELLGLIPSSSSPSDCL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g01578 479 Gene3D - 50 201 IPR036188 -
Spst8g01578 479 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 370 386 - -
Spst8g01578 479 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 50 72 - -
Spst8g01578 479 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 355 370 - -
Spst8g01578 479 Gene3D - 350 440 IPR036188 -
Spst8g01578 479 SUPERFAMILY FAD-linked reductases, C-terminal domain 226 346 - -
Spst8g01578 479 Gene3D - 221 349 - -
Spst8g01578 479 Pfam FAD dependent oxidoreductase 51 113 IPR006076 GO:0016491
Spst8g01578 479 PANTHER MONOOXYGENASE-LIKE 47 462 - -
Spst8g01578 479 SUPERFAMILY FAD/NAD(P)-binding domain 49 429 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g01578 Spst-Chr8 17999047 18010138 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g01578 - - gmx:100811757 665.996